Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.23□□□□□ -0.13
P06328 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.23□□□□□ -0.13
P06328 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.23□□□□□ -0.13
P06328 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06328 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06328 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06328 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06328 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06328 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.22□□□□□ -0.13
P06328 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.22□□□□□ -0.13
P06328 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.22□□□□□ -0.13
P06328 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06328 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06328 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P06328 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06328 AA386476-201ENSMUST00000098781 1665 ntBASIC14.22□□□□□ -0.13
P06328 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
P06328 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06328 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P06328 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
P06328 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P06328 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.21□□□□□ -0.13
P06328 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
P06328 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.2□□□□□ -0.14
P06328 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
P06328 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
P06328 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.2□□□□□ -0.14
P06328 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06328 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06328 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06328 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06328 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06328 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06328 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06328 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06328 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.19□□□□□ -0.14
P06328 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
P06328 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06328 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06328 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
P06328 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06328 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06328 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.19□□□□□ -0.14
P06328 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06328 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.19□□□□□ -0.14
P06328 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P06328 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
P06328 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P06328 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.19□□□□□ -0.14
P06328 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
P06328 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P06328 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.18□□□□□ -0.14
P06328 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
P06328 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06328 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
P06328 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06328 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
P06328 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06328 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06328 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06328 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06328 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06328 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
P06328 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P06328 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06328 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06328 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P06328 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06328 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06328 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
P06328 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06328 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P06328 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.17□□□□□ -0.14
P06328 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.17□□□□□ -0.14
P06328 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06328 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06328 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06328 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06328 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06328 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P06328 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06328 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
P06328 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06328 Golph3-205ENSMUST00000228671 2842 ntBASIC14.16□□□□□ -0.14
P06328 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P06328 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06328 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06328 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
P06328 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.16□□□□□ -0.14
P06328 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
P06328 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.16□□□□□ -0.14
P06328 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.16□□□□□ -0.14
P06328 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P06328 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P06328 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
P06328 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
P06328 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06328 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06328 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
P06328 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms