Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04224 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04224 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04224 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
P04224 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04224 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04224 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04224 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04224 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
P04224 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.02■□□□□ 0.32
P04224 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.02■□□□□ 0.32
P04224 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04224 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
P04224 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.02■□□□□ 0.31
P04224 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.02■□□□□ 0.31
P04224 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
P04224 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04224 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
P04224 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04224 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04224 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04224 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
P04224 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04224 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04224 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
P04224 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17■□□□□ 0.31
P04224 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17■□□□□ 0.31
P04224 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P04224 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
P04224 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
P04224 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17■□□□□ 0.31
P04224 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17■□□□□ 0.31
P04224 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
P04224 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P04224 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17■□□□□ 0.31
P04224 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
P04224 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P04224 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P04224 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
P04224 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
P04224 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
P04224 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.99■□□□□ 0.31
P04224 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
P04224 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
P04224 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
P04224 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P04224 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
P04224 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
P04224 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P04224 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P04224 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
P04224 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04224 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04224 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04224 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
P04224 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
P04224 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
P04224 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04224 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
P04224 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04224 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
P04224 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
P04224 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.97■□□□□ 0.31
P04224 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
P04224 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
P04224 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
P04224 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
P04224 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
P04224 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
P04224 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04224 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04224 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04224 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04224 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
P04224 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.96■□□□□ 0.31
P04224 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04224 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
P04224 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
P04224 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
P04224 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.96■□□□□ 0.31
P04224 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.96■□□□□ 0.31
P04224 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P04224 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
P04224 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
P04224 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04224 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.95■□□□□ 0.3
P04224 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04224 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04224 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
P04224 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04224 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04224 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04224 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.95■□□□□ 0.3
P04224 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04224 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04224 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04224 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04224 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P04224 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
P04224 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms