Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf17O88472 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf17O88472 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf17O88472 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.18■□□□□ 0.5
Tnfrsf17O88472 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tnfrsf17O88472 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf17O88472 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf17O88472 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.18■□□□□ 0.5
Tnfrsf17O88472 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.18■□□□□ 0.5
Tnfrsf17O88472 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf17O88472 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf17O88472 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf17O88472 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf17O88472 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf17O88472 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf17O88472 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf17O88472 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf17O88472 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Tnfrsf17O88472 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf17O88472 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.17■□□□□ 0.5
Tnfrsf17O88472 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.17■□□□□ 0.5
Tnfrsf17O88472 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf17O88472 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf17O88472 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf17O88472 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf17O88472 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf17O88472 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf17O88472 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf17O88472 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf17O88472 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf17O88472 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf17O88472 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf17O88472 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Tnfrsf17O88472 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf17O88472 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf17O88472 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf17O88472 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf17O88472 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.15■□□□□ 0.5
Tnfrsf17O88472 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf17O88472 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf17O88472 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf17O88472 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.15■□□□□ 0.5
Tnfrsf17O88472 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf17O88472 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf17O88472 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.15■□□□□ 0.5
Tnfrsf17O88472 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf17O88472 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.14■□□□□ 0.5
Tnfrsf17O88472 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf17O88472 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf17O88472 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Tnfrsf17O88472 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf17O88472 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf17O88472 Gm9987-201ENSMUST00000069768 567 ntBASIC18.14■□□□□ 0.49
Tnfrsf17O88472 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf17O88472 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf17O88472 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf17O88472 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf17O88472 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.13■□□□□ 0.49
Tnfrsf17O88472 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf17O88472 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf17O88472 Gm37055-201ENSMUST00000191866 133 ntBASIC18.13■□□□□ 0.49
Tnfrsf17O88472 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf17O88472 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.13■□□□□ 0.49
Tnfrsf17O88472 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.13■□□□□ 0.49
Tnfrsf17O88472 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf17O88472 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf17O88472 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf17O88472 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Tnfrsf17O88472 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf17O88472 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf17O88472 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Tnfrsf17O88472 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.12■□□□□ 0.49
Tnfrsf17O88472 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.12■□□□□ 0.49
Tnfrsf17O88472 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf17O88472 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf17O88472 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tnfrsf17O88472 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
Tnfrsf17O88472 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfrsf17O88472 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.11■□□□□ 0.49
Tnfrsf17O88472 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Tnfrsf17O88472 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Tnfrsf17O88472 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfrsf17O88472 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfrsf17O88472 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfrsf17O88472 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Tnfrsf17O88472 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf17O88472 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf17O88472 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf17O88472 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfrsf17O88472 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf17O88472 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf17O88472 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf17O88472 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf17O88472 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfrsf17O88472 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Tnfrsf17O88472 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Tnfrsf17O88472 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.09■□□□□ 0.49
Tnfrsf17O88472 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Tnfrsf17O88472 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.09■□□□□ 0.49
Tnfrsf17O88472 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms