Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf13O54965 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf13O54965 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf13O54965 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rnf13O54965 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.6■□□□□ 0.41
Rnf13O54965 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf13O54965 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf13O54965 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf13O54965 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf13O54965 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf13O54965 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf13O54965 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf13O54965 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.59■□□□□ 0.41
Rnf13O54965 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf13O54965 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf13O54965 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf13O54965 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Rnf13O54965 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf13O54965 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf13O54965 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.58■□□□□ 0.41
Rnf13O54965 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf13O54965 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf13O54965 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf13O54965 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.58■□□□□ 0.41
Rnf13O54965 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf13O54965 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.58■□□□□ 0.4
Rnf13O54965 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf13O54965 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.58■□□□□ 0.4
Rnf13O54965 Gm15820-201ENSMUST00000201566 728 ntBASIC17.58■□□□□ 0.4
Rnf13O54965 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf13O54965 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf13O54965 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf13O54965 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Rnf13O54965 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rnf13O54965 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf13O54965 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf13O54965 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf13O54965 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rnf13O54965 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf13O54965 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Rnf13O54965 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rnf13O54965 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf13O54965 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf13O54965 Gm9870-201ENSMUST00000063874 645 ntBASIC17.57■□□□□ 0.4
Rnf13O54965 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf13O54965 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf13O54965 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Rnf13O54965 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf13O54965 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf13O54965 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf13O54965 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf13O54965 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.56■□□□□ 0.4
Rnf13O54965 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rnf13O54965 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Rnf13O54965 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf13O54965 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rnf13O54965 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rnf13O54965 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf13O54965 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf13O54965 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf13O54965 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf13O54965 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf13O54965 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf13O54965 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf13O54965 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf13O54965 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf13O54965 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.55■□□□□ 0.4
Rnf13O54965 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.55■□□□□ 0.4
Rnf13O54965 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.55■□□□□ 0.4
Rnf13O54965 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf13O54965 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf13O54965 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rnf13O54965 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf13O54965 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf13O54965 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf13O54965 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf13O54965 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf13O54965 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf13O54965 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf13O54965 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf13O54965 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf13O54965 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf13O54965 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf13O54965 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf13O54965 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf13O54965 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
Rnf13O54965 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf13O54965 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf13O54965 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf13O54965 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rnf13O54965 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf13O54965 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf13O54965 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.53■□□□□ 0.4
Rnf13O54965 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.53■□□□□ 0.4
Rnf13O54965 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.53■□□□□ 0.4
Rnf13O54965 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.53■□□□□ 0.4
Rnf13O54965 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.53■□□□□ 0.4
Rnf13O54965 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf13O54965 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf13O54965 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms