Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
DDX39AO00148 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.68■■□□□ 1.54
DDX39AO00148 AL031602.1-201ENST00000633169 911 ntBASIC24.68■■□□□ 1.54
DDX39AO00148 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
DDX39AO00148 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
DDX39AO00148 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DDX39AO00148 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
DDX39AO00148 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.67■■□□□ 1.54
DDX39AO00148 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.67■■□□□ 1.54
DDX39AO00148 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.67■■□□□ 1.54
DDX39AO00148 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.67■■□□□ 1.54
DDX39AO00148 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
DDX39AO00148 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
DDX39AO00148 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
DDX39AO00148 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.67■■□□□ 1.54
DDX39AO00148 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.67■■□□□ 1.54
DDX39AO00148 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.67■■□□□ 1.54
DDX39AO00148 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
DDX39AO00148 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
DDX39AO00148 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
DDX39AO00148 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX39AO00148 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX39AO00148 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.66■■□□□ 1.54
DDX39AO00148 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX39AO00148 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.66■■□□□ 1.54
DDX39AO00148 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.66■■□□□ 1.54
DDX39AO00148 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.66■■□□□ 1.54
DDX39AO00148 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX39AO00148 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX39AO00148 AC097381.1-201ENST00000429019 1296 ntBASIC24.66■■□□□ 1.54
DDX39AO00148 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
DDX39AO00148 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
DDX39AO00148 MIR6821-201ENST00000617625 74 ntBASIC24.66■■□□□ 1.54
DDX39AO00148 AC105233.4-201ENST00000642045 216 ntBASIC24.66■■□□□ 1.54
DDX39AO00148 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
DDX39AO00148 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.66■■□□□ 1.54
DDX39AO00148 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
DDX39AO00148 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX39AO00148 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX39AO00148 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.65■■□□□ 1.54
DDX39AO00148 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX39AO00148 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX39AO00148 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
DDX39AO00148 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX39AO00148 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX39AO00148 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.65■■□□□ 1.54
DDX39AO00148 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.64■■□□□ 1.54
DDX39AO00148 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
DDX39AO00148 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.64■■□□□ 1.54
DDX39AO00148 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.64■■□□□ 1.54
DDX39AO00148 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.64■■□□□ 1.54
DDX39AO00148 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.64■■□□□ 1.54
DDX39AO00148 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.64■■□□□ 1.54
DDX39AO00148 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.64■■□□□ 1.54
DDX39AO00148 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.64■■□□□ 1.54
DDX39AO00148 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.64■■□□□ 1.54
DDX39AO00148 AL358852.1-201ENST00000623174 1268 ntBASIC24.64■■□□□ 1.54
DDX39AO00148 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
DDX39AO00148 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.53
DDX39AO00148 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.64■■□□□ 1.53
DDX39AO00148 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.64■■□□□ 1.53
DDX39AO00148 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
DDX39AO00148 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
DDX39AO00148 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
DDX39AO00148 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
DDX39AO00148 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.63■■□□□ 1.53
DDX39AO00148 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
DDX39AO00148 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
DDX39AO00148 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
DDX39AO00148 AC010141.3-201ENST00000456659 717 ntBASIC24.63■■□□□ 1.53
DDX39AO00148 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.63■■□□□ 1.53
DDX39AO00148 MIR5787-201ENST00000611784 55 ntBASIC24.63■■□□□ 1.53
DDX39AO00148 AC068587.7-201ENST00000641602 218 ntBASIC24.63■■□□□ 1.53
DDX39AO00148 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX39AO00148 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
DDX39AO00148 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.63■■□□□ 1.53
DDX39AO00148 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX39AO00148 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX39AO00148 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
DDX39AO00148 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX39AO00148 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
DDX39AO00148 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.62■■□□□ 1.53
DDX39AO00148 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
DDX39AO00148 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
DDX39AO00148 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
DDX39AO00148 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
DDX39AO00148 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
DDX39AO00148 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.62■■□□□ 1.53
DDX39AO00148 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.62■■□□□ 1.53
DDX39AO00148 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.62■■□□□ 1.53
DDX39AO00148 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.62■■□□□ 1.53
DDX39AO00148 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.62■■□□□ 1.53
DDX39AO00148 AC087239.1-201ENST00000622671 572 ntBASIC24.62■■□□□ 1.53
DDX39AO00148 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.62■■□□□ 1.53
DDX39AO00148 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
DDX39AO00148 LINC01960-201ENST00000563759 1884 ntBASIC24.62■■□□□ 1.53
DDX39AO00148 C9orf163-202ENST00000624034 2573 ntBASIC24.61■■□□□ 1.53
DDX39AO00148 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.61■■□□□ 1.53
DDX39AO00148 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.61■■□□□ 1.53
DDX39AO00148 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms