Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm15546-201ENSMUST00000122095 826 ntBASIC17.49■□□□□ 0.39
Pcdh1F7BJK1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh1F7BJK1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh1F7BJK1 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.49■□□□□ 0.39
Pcdh1F7BJK1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh1F7BJK1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh1F7BJK1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh1F7BJK1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh1F7BJK1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh1F7BJK1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh1F7BJK1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdh1F7BJK1 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.48■□□□□ 0.39
Pcdh1F7BJK1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh1F7BJK1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh1F7BJK1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.48■□□□□ 0.39
Pcdh1F7BJK1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.48■□□□□ 0.39
Pcdh1F7BJK1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh1F7BJK1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh1F7BJK1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh1F7BJK1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.46■□□□□ 0.39
Pcdh1F7BJK1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh1F7BJK1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh1F7BJK1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pcdh1F7BJK1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdh1F7BJK1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh1F7BJK1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdh1F7BJK1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh1F7BJK1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh1F7BJK1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh1F7BJK1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh1F7BJK1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh1F7BJK1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdh1F7BJK1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.45■□□□□ 0.38
Pcdh1F7BJK1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdh1F7BJK1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdh1F7BJK1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdh1F7BJK1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh1F7BJK1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh1F7BJK1 AA386476-201ENSMUST00000098781 1665 ntBASIC17.45■□□□□ 0.38
Pcdh1F7BJK1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh1F7BJK1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh1F7BJK1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.44■□□□□ 0.38
Pcdh1F7BJK1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh1F7BJK1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh1F7BJK1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh1F7BJK1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh1F7BJK1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdh1F7BJK1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Pcdh1F7BJK1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh1F7BJK1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh1F7BJK1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh1F7BJK1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh1F7BJK1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh1F7BJK1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh1F7BJK1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdh1F7BJK1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.43■□□□□ 0.38
Pcdh1F7BJK1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.43■□□□□ 0.38
Pcdh1F7BJK1 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.43■□□□□ 0.38
Pcdh1F7BJK1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh1F7BJK1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdh1F7BJK1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh1F7BJK1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh1F7BJK1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh1F7BJK1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh1F7BJK1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdh1F7BJK1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh1F7BJK1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdh1F7BJK1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh1F7BJK1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh1F7BJK1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh1F7BJK1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh1F7BJK1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.42■□□□□ 0.38
Pcdh1F7BJK1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh1F7BJK1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.42■□□□□ 0.38
Pcdh1F7BJK1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdh1F7BJK1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh1F7BJK1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms