Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Ift140E9PY46 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
Ift140E9PY46 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ift140E9PY46 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Ift140E9PY46 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Ift140E9PY46 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
Ift140E9PY46 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ift140E9PY46 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC31.4■■■□□ 2.62
Ift140E9PY46 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Ift140E9PY46 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ift140E9PY46 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC31.4■■■□□ 2.62
Ift140E9PY46 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ift140E9PY46 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ift140E9PY46 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ift140E9PY46 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Ift140E9PY46 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Ift140E9PY46 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC31.39■■■□□ 2.62
Ift140E9PY46 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC31.39■■■□□ 2.62
Ift140E9PY46 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Ift140E9PY46 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Ift140E9PY46 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ift140E9PY46 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ift140E9PY46 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Ift140E9PY46 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
Ift140E9PY46 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Ift140E9PY46 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
Ift140E9PY46 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
Ift140E9PY46 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Ift140E9PY46 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC31.37■■■□□ 2.61
Ift140E9PY46 Gm21596-201ENSMUST00000178049 1316 ntBASIC31.37■■■□□ 2.61
Ift140E9PY46 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC31.36■■■□□ 2.61
Ift140E9PY46 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
Ift140E9PY46 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ift140E9PY46 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC31.36■■■□□ 2.61
Ift140E9PY46 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Ift140E9PY46 AC154266.1-201ENSMUST00000223190 503 ntBASIC31.36■■■□□ 2.61
Ift140E9PY46 AC121577.1-201ENSMUST00000227302 707 ntBASIC31.36■■■□□ 2.61
Ift140E9PY46 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ift140E9PY46 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC31.36■■■□□ 2.61
Ift140E9PY46 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC31.36■■■□□ 2.61
Ift140E9PY46 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ift140E9PY46 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
Ift140E9PY46 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC31.35■■■□□ 2.61
Ift140E9PY46 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
Ift140E9PY46 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ift140E9PY46 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ift140E9PY46 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Ift140E9PY46 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC31.34■■■□□ 2.61
Ift140E9PY46 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Ift140E9PY46 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ift140E9PY46 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ift140E9PY46 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Ift140E9PY46 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ift140E9PY46 Gm7860-201ENSMUST00000121190 879 ntBASIC31.33■■■□□ 2.61
Ift140E9PY46 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC31.33■■■□□ 2.61
Ift140E9PY46 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC31.33■■■□□ 2.61
Ift140E9PY46 Gm18666-201ENSMUST00000190039 958 ntBASIC31.33■■■□□ 2.61
Ift140E9PY46 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.61
Ift140E9PY46 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
Ift140E9PY46 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Ift140E9PY46 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Ift140E9PY46 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Ift140E9PY46 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Ift140E9PY46 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Ift140E9PY46 Mir1199-201ENSMUST00000117015 119 ntBASIC31.32■■■□□ 2.6
Ift140E9PY46 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Ift140E9PY46 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Ift140E9PY46 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC31.32■■■□□ 2.6
Ift140E9PY46 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC31.32■■■□□ 2.6
Ift140E9PY46 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Ift140E9PY46 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC31.31■■■□□ 2.6
Ift140E9PY46 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ift140E9PY46 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Ift140E9PY46 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ift140E9PY46 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Ift140E9PY46 Gm11249-201ENSMUST00000117071 859 ntBASIC31.31■■■□□ 2.6
Ift140E9PY46 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
Ift140E9PY46 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ift140E9PY46 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ift140E9PY46 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ift140E9PY46 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
Ift140E9PY46 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ift140E9PY46 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC31.3■■■□□ 2.6
Ift140E9PY46 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ift140E9PY46 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Ift140E9PY46 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ift140E9PY46 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC31.29■■■□□ 2.6
Ift140E9PY46 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ift140E9PY46 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ift140E9PY46 Gm27032-201ENSMUST00000183124 1116 ntBASIC31.28■■■□□ 2.6
Ift140E9PY46 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Ift140E9PY46 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Ift140E9PY46 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Ift140E9PY46 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ift140E9PY46 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC31.27■■■□□ 2.6
Ift140E9PY46 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ift140E9PY46 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Ift140E9PY46 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
Ift140E9PY46 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
Ift140E9PY46 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms