Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12-1A0N8R1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12-1A0N8R1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Trav12-1A0N8R1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12-1A0N8R1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12-1A0N8R1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav12-1A0N8R1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12-1A0N8R1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12-1A0N8R1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12-1A0N8R1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12-1A0N8R1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12-1A0N8R1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Trav12-1A0N8R1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12-1A0N8R1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12-1A0N8R1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12-1A0N8R1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12-1A0N8R1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12-1A0N8R1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12-1A0N8R1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav12-1A0N8R1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12-1A0N8R1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12-1A0N8R1 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.22■□□□□ 0.19
Trav12-1A0N8R1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12-1A0N8R1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12-1A0N8R1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12-1A0N8R1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trav12-1A0N8R1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12-1A0N8R1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trav12-1A0N8R1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12-1A0N8R1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12-1A0N8R1 Gm5812-201ENSMUST00000061073 957 ntBASIC16.22■□□□□ 0.19
Trav12-1A0N8R1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trav12-1A0N8R1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12-1A0N8R1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12-1A0N8R1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12-1A0N8R1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Trav12-1A0N8R1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12-1A0N8R1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12-1A0N8R1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12-1A0N8R1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.21■□□□□ 0.19
Trav12-1A0N8R1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav12-1A0N8R1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12-1A0N8R1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12-1A0N8R1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12-1A0N8R1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12-1A0N8R1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12-1A0N8R1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav12-1A0N8R1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12-1A0N8R1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.21■□□□□ 0.19
Trav12-1A0N8R1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trav12-1A0N8R1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Trav12-1A0N8R1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12-1A0N8R1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12-1A0N8R1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
Trav12-1A0N8R1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12-1A0N8R1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12-1A0N8R1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12-1A0N8R1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12-1A0N8R1 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.2■□□□□ 0.18
Trav12-1A0N8R1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12-1A0N8R1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12-1A0N8R1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12-1A0N8R1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12-1A0N8R1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12-1A0N8R1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav12-1A0N8R1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav12-1A0N8R1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12-1A0N8R1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12-1A0N8R1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12-1A0N8R1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav12-1A0N8R1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav12-1A0N8R1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav12-1A0N8R1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Trav12-1A0N8R1 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.19■□□□□ 0.18
Trav12-1A0N8R1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.19■□□□□ 0.18
Trav12-1A0N8R1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12-1A0N8R1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.19■□□□□ 0.18
Trav12-1A0N8R1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12-1A0N8R1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav12-1A0N8R1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav12-1A0N8R1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12-1A0N8R1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12-1A0N8R1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12-1A0N8R1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Trav12-1A0N8R1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12-1A0N8R1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12-1A0N8R1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12-1A0N8R1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12-1A0N8R1 Gm15546-201ENSMUST00000122095 826 ntBASIC16.18■□□□□ 0.18
Trav12-1A0N8R1 Gm22238-201ENSMUST00000175222 88 ntBASIC16.18■□□□□ 0.18
Trav12-1A0N8R1 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.18■□□□□ 0.18
Trav12-1A0N8R1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav12-1A0N8R1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12-1A0N8R1 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.18■□□□□ 0.18
Trav12-1A0N8R1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12-1A0N8R1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12-1A0N8R1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12-1A0N8R1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12-1A0N8R1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12-1A0N8R1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms