Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav4n-4A0A075B615 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav4n-4A0A075B615 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav4n-4A0A075B615 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav4n-4A0A075B615 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav4n-4A0A075B615 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav4n-4A0A075B615 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav4n-4A0A075B615 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4n-4A0A075B615 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4n-4A0A075B615 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4n-4A0A075B615 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4n-4A0A075B615 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4n-4A0A075B615 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4n-4A0A075B615 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav4n-4A0A075B615 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav4n-4A0A075B615 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4n-4A0A075B615 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4n-4A0A075B615 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav4n-4A0A075B615 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4n-4A0A075B615 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4n-4A0A075B615 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4n-4A0A075B615 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4n-4A0A075B615 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav4n-4A0A075B615 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4n-4A0A075B615 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4n-4A0A075B615 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4n-4A0A075B615 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4n-4A0A075B615 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4n-4A0A075B615 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav4n-4A0A075B615 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav4n-4A0A075B615 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4n-4A0A075B615 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Trav4n-4A0A075B615 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4n-4A0A075B615 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav4n-4A0A075B615 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4n-4A0A075B615 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4n-4A0A075B615 Pkd1-207ENSMUST00000228550 1050 ntBASIC13.49□□□□□ -0.25
Trav4n-4A0A075B615 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4n-4A0A075B615 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav4n-4A0A075B615 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4n-4A0A075B615 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4n-4A0A075B615 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4n-4A0A075B615 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4n-4A0A075B615 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav4n-4A0A075B615 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4n-4A0A075B615 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4n-4A0A075B615 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4n-4A0A075B615 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4n-4A0A075B615 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4n-4A0A075B615 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4n-4A0A075B615 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav4n-4A0A075B615 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4n-4A0A075B615 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav4n-4A0A075B615 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav4n-4A0A075B615 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4n-4A0A075B615 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4n-4A0A075B615 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4n-4A0A075B615 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4n-4A0A075B615 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4n-4A0A075B615 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4n-4A0A075B615 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4n-4A0A075B615 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav4n-4A0A075B615 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav4n-4A0A075B615 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4n-4A0A075B615 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4n-4A0A075B615 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4n-4A0A075B615 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4n-4A0A075B615 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav4n-4A0A075B615 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms