Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdfS4R2K0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdfS4R2K0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdfS4R2K0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdfS4R2K0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdfS4R2K0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdfS4R2K0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.91□□□□□ -0.02
PdfS4R2K0 Gm10232-201ENSMUST00000089221 720 ntBASIC14.91□□□□□ -0.02
PdfS4R2K0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdfS4R2K0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PdfS4R2K0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdfS4R2K0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdfS4R2K0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdfS4R2K0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdfS4R2K0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdfS4R2K0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdfS4R2K0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PdfS4R2K0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdfS4R2K0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PdfS4R2K0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdfS4R2K0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdfS4R2K0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdfS4R2K0 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.9□□□□□ -0.02
PdfS4R2K0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.9□□□□□ -0.02
PdfS4R2K0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdfS4R2K0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.9□□□□□ -0.02
PdfS4R2K0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.9□□□□□ -0.02
PdfS4R2K0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.9□□□□□ -0.02
PdfS4R2K0 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.9□□□□□ -0.02
PdfS4R2K0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
PdfS4R2K0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PdfS4R2K0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PdfS4R2K0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
PdfS4R2K0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdfS4R2K0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PdfS4R2K0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PdfS4R2K0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdfS4R2K0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PdfS4R2K0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdfS4R2K0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PdfS4R2K0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PdfS4R2K0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PdfS4R2K0 Gm15820-201ENSMUST00000201566 728 ntBASIC14.89□□□□□ -0.03
PdfS4R2K0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PdfS4R2K0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PdfS4R2K0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PdfS4R2K0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PdfS4R2K0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PdfS4R2K0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PdfS4R2K0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PdfS4R2K0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PdfS4R2K0 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.88□□□□□ -0.03
PdfS4R2K0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PdfS4R2K0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PdfS4R2K0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.88□□□□□ -0.03
PdfS4R2K0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PdfS4R2K0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PdfS4R2K0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PdfS4R2K0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PdfS4R2K0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PdfS4R2K0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PdfS4R2K0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PdfS4R2K0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PdfS4R2K0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PdfS4R2K0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PdfS4R2K0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PdfS4R2K0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PdfS4R2K0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.87□□□□□ -0.03
PdfS4R2K0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PdfS4R2K0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
PdfS4R2K0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PdfS4R2K0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PdfS4R2K0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PdfS4R2K0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PdfS4R2K0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PdfS4R2K0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PdfS4R2K0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PdfS4R2K0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PdfS4R2K0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PdfS4R2K0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PdfS4R2K0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PdfS4R2K0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PdfS4R2K0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PdfS4R2K0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.86□□□□□ -0.03
PdfS4R2K0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PdfS4R2K0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PdfS4R2K0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC14.86□□□□□ -0.03
PdfS4R2K0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.86□□□□□ -0.03
PdfS4R2K0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PdfS4R2K0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PdfS4R2K0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PdfS4R2K0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PdfS4R2K0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PdfS4R2K0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PdfS4R2K0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.86□□□□□ -0.03
PdfS4R2K0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PdfS4R2K0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PdfS4R2K0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PdfS4R2K0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PdfS4R2K0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms