Protein–RNA interactions for Protein: Q9JJY3

Smpd3, Sphingomyelin phosphodiesterase 3, mousemouse

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd3Q9JJY3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smpd3Q9JJY3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smpd3Q9JJY3 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.83■□□□□ 0.61
Smpd3Q9JJY3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smpd3Q9JJY3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smpd3Q9JJY3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.83■□□□□ 0.6
Smpd3Q9JJY3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Smpd3Q9JJY3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smpd3Q9JJY3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smpd3Q9JJY3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Smpd3Q9JJY3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Smpd3Q9JJY3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smpd3Q9JJY3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smpd3Q9JJY3 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.82■□□□□ 0.6
Smpd3Q9JJY3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smpd3Q9JJY3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.82■□□□□ 0.6
Smpd3Q9JJY3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smpd3Q9JJY3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smpd3Q9JJY3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smpd3Q9JJY3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smpd3Q9JJY3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smpd3Q9JJY3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smpd3Q9JJY3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smpd3Q9JJY3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smpd3Q9JJY3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smpd3Q9JJY3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpd3Q9JJY3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpd3Q9JJY3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpd3Q9JJY3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpd3Q9JJY3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Smpd3Q9JJY3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smpd3Q9JJY3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smpd3Q9JJY3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpd3Q9JJY3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smpd3Q9JJY3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smpd3Q9JJY3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.81■□□□□ 0.6
Smpd3Q9JJY3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpd3Q9JJY3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpd3Q9JJY3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpd3Q9JJY3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Smpd3Q9JJY3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpd3Q9JJY3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smpd3Q9JJY3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.8■□□□□ 0.6
Smpd3Q9JJY3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smpd3Q9JJY3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smpd3Q9JJY3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smpd3Q9JJY3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smpd3Q9JJY3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Smpd3Q9JJY3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smpd3Q9JJY3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Smpd3Q9JJY3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smpd3Q9JJY3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smpd3Q9JJY3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smpd3Q9JJY3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smpd3Q9JJY3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smpd3Q9JJY3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smpd3Q9JJY3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smpd3Q9JJY3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smpd3Q9JJY3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smpd3Q9JJY3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smpd3Q9JJY3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smpd3Q9JJY3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smpd3Q9JJY3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smpd3Q9JJY3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Smpd3Q9JJY3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.79■□□□□ 0.6
Smpd3Q9JJY3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Smpd3Q9JJY3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smpd3Q9JJY3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smpd3Q9JJY3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.78■□□□□ 0.6
Smpd3Q9JJY3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.78■□□□□ 0.6
Smpd3Q9JJY3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smpd3Q9JJY3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.78■□□□□ 0.6
Smpd3Q9JJY3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smpd3Q9JJY3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smpd3Q9JJY3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smpd3Q9JJY3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smpd3Q9JJY3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smpd3Q9JJY3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smpd3Q9JJY3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smpd3Q9JJY3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smpd3Q9JJY3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Smpd3Q9JJY3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smpd3Q9JJY3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smpd3Q9JJY3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smpd3Q9JJY3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smpd3Q9JJY3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
Smpd3Q9JJY3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Smpd3Q9JJY3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smpd3Q9JJY3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smpd3Q9JJY3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smpd3Q9JJY3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smpd3Q9JJY3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.76■□□□□ 0.59
Smpd3Q9JJY3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smpd3Q9JJY3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smpd3Q9JJY3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smpd3Q9JJY3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.75■□□□□ 0.59
Smpd3Q9JJY3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smpd3Q9JJY3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smpd3Q9JJY3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smpd3Q9JJY3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms