Protein–RNA interactions for Protein: Q9D3I8

Rhox4a, Reproductive homeobox 4A, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4aQ9D3I8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rhox4aQ9D3I8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.17■□□□□ 0.18
Rhox4aQ9D3I8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.17■□□□□ 0.18
Rhox4aQ9D3I8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rhox4aQ9D3I8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rhox4aQ9D3I8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rhox4aQ9D3I8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rhox4aQ9D3I8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rhox4aQ9D3I8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rhox4aQ9D3I8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rhox4aQ9D3I8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.16■□□□□ 0.18
Rhox4aQ9D3I8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.16■□□□□ 0.18
Rhox4aQ9D3I8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rhox4aQ9D3I8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rhox4aQ9D3I8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rhox4aQ9D3I8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rhox4aQ9D3I8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rhox4aQ9D3I8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rhox4aQ9D3I8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.16■□□□□ 0.18
Rhox4aQ9D3I8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rhox4aQ9D3I8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rhox4aQ9D3I8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.16■□□□□ 0.18
Rhox4aQ9D3I8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rhox4aQ9D3I8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rhox4aQ9D3I8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.16■□□□□ 0.18
Rhox4aQ9D3I8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rhox4aQ9D3I8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Gm27502-201ENSMUST00000183495 199 ntBASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rhox4aQ9D3I8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rhox4aQ9D3I8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rhox4aQ9D3I8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rhox4aQ9D3I8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rhox4aQ9D3I8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rhox4aQ9D3I8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rhox4aQ9D3I8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rhox4aQ9D3I8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rhox4aQ9D3I8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rhox4aQ9D3I8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rhox4aQ9D3I8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.14■□□□□ 0.17
Rhox4aQ9D3I8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rhox4aQ9D3I8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.14■□□□□ 0.17
Rhox4aQ9D3I8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rhox4aQ9D3I8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rhox4aQ9D3I8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rhox4aQ9D3I8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rhox4aQ9D3I8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rhox4aQ9D3I8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rhox4aQ9D3I8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4aQ9D3I8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4aQ9D3I8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4aQ9D3I8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4aQ9D3I8 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.13■□□□□ 0.17
Rhox4aQ9D3I8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4aQ9D3I8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rhox4aQ9D3I8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4aQ9D3I8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4aQ9D3I8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4aQ9D3I8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4aQ9D3I8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Rhox4aQ9D3I8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Rhox4aQ9D3I8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4aQ9D3I8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4aQ9D3I8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4aQ9D3I8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rhox4aQ9D3I8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Rhox4aQ9D3I8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rhox4aQ9D3I8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rhox4aQ9D3I8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rhox4aQ9D3I8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rhox4aQ9D3I8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.12■□□□□ 0.17
Rhox4aQ9D3I8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rhox4aQ9D3I8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rhox4aQ9D3I8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rhox4aQ9D3I8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rhox4aQ9D3I8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rhox4aQ9D3I8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rhox4aQ9D3I8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rhox4aQ9D3I8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rhox4aQ9D3I8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rhox4aQ9D3I8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms