Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TpbpbQ9CQC0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TpbpbQ9CQC0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TpbpbQ9CQC0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TpbpbQ9CQC0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TpbpbQ9CQC0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TpbpbQ9CQC0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TpbpbQ9CQC0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TpbpbQ9CQC0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TpbpbQ9CQC0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.43■□□□□ 0.38
TpbpbQ9CQC0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TpbpbQ9CQC0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TpbpbQ9CQC0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.42■□□□□ 0.38
TpbpbQ9CQC0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TpbpbQ9CQC0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TpbpbQ9CQC0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TpbpbQ9CQC0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
TpbpbQ9CQC0 Gm10399-202ENSMUST00000202768 748 ntBASIC17.42■□□□□ 0.38
TpbpbQ9CQC0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TpbpbQ9CQC0 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.42■□□□□ 0.38
TpbpbQ9CQC0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TpbpbQ9CQC0 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.42■□□□□ 0.38
TpbpbQ9CQC0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TpbpbQ9CQC0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TpbpbQ9CQC0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TpbpbQ9CQC0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TpbpbQ9CQC0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TpbpbQ9CQC0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TpbpbQ9CQC0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TpbpbQ9CQC0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TpbpbQ9CQC0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.41■□□□□ 0.38
TpbpbQ9CQC0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.41■□□□□ 0.38
TpbpbQ9CQC0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TpbpbQ9CQC0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TpbpbQ9CQC0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TpbpbQ9CQC0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TpbpbQ9CQC0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TpbpbQ9CQC0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TpbpbQ9CQC0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TpbpbQ9CQC0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TpbpbQ9CQC0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TpbpbQ9CQC0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TpbpbQ9CQC0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TpbpbQ9CQC0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TpbpbQ9CQC0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TpbpbQ9CQC0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TpbpbQ9CQC0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TpbpbQ9CQC0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TpbpbQ9CQC0 Mir6538-201ENSMUST00000183713 110 ntBASIC17.4■□□□□ 0.38
TpbpbQ9CQC0 Gm45444-201ENSMUST00000211394 898 ntBASIC17.4■□□□□ 0.38
TpbpbQ9CQC0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TpbpbQ9CQC0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TpbpbQ9CQC0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TpbpbQ9CQC0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TpbpbQ9CQC0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TpbpbQ9CQC0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
TpbpbQ9CQC0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TpbpbQ9CQC0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TpbpbQ9CQC0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TpbpbQ9CQC0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
TpbpbQ9CQC0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TpbpbQ9CQC0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TpbpbQ9CQC0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TpbpbQ9CQC0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TpbpbQ9CQC0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TpbpbQ9CQC0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TpbpbQ9CQC0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TpbpbQ9CQC0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TpbpbQ9CQC0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TpbpbQ9CQC0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TpbpbQ9CQC0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.38■□□□□ 0.37
TpbpbQ9CQC0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TpbpbQ9CQC0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.38■□□□□ 0.37
TpbpbQ9CQC0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TpbpbQ9CQC0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.38■□□□□ 0.37
TpbpbQ9CQC0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.38■□□□□ 0.37
TpbpbQ9CQC0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TpbpbQ9CQC0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TpbpbQ9CQC0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TpbpbQ9CQC0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TpbpbQ9CQC0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TpbpbQ9CQC0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TpbpbQ9CQC0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.38■□□□□ 0.37
TpbpbQ9CQC0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TpbpbQ9CQC0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TpbpbQ9CQC0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TpbpbQ9CQC0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TpbpbQ9CQC0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TpbpbQ9CQC0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TpbpbQ9CQC0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TpbpbQ9CQC0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
TpbpbQ9CQC0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.37■□□□□ 0.37
TpbpbQ9CQC0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TpbpbQ9CQC0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TpbpbQ9CQC0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TpbpbQ9CQC0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TpbpbQ9CQC0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TpbpbQ9CQC0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.36■□□□□ 0.37
TpbpbQ9CQC0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TpbpbQ9CQC0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms