Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Homer3Q99JP6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Homer3Q99JP6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Homer3Q99JP6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Homer3Q99JP6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Homer3Q99JP6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.41■□□□□ 0.7
Homer3Q99JP6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Homer3Q99JP6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Homer3Q99JP6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Homer3Q99JP6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Homer3Q99JP6 Gm9870-201ENSMUST00000063874 645 ntBASIC19.41■□□□□ 0.7
Homer3Q99JP6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Homer3Q99JP6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Homer3Q99JP6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Homer3Q99JP6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Homer3Q99JP6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Homer3Q99JP6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Homer3Q99JP6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Homer3Q99JP6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Homer3Q99JP6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.4■□□□□ 0.7
Homer3Q99JP6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.4■□□□□ 0.7
Homer3Q99JP6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Homer3Q99JP6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Homer3Q99JP6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Homer3Q99JP6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Homer3Q99JP6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.39■□□□□ 0.7
Homer3Q99JP6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.39■□□□□ 0.69
Homer3Q99JP6 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.39■□□□□ 0.69
Homer3Q99JP6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.39■□□□□ 0.69
Homer3Q99JP6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Homer3Q99JP6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Homer3Q99JP6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.39■□□□□ 0.69
Homer3Q99JP6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Homer3Q99JP6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Homer3Q99JP6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Homer3Q99JP6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Homer3Q99JP6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Homer3Q99JP6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Homer3Q99JP6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Homer3Q99JP6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Homer3Q99JP6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Homer3Q99JP6 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.38■□□□□ 0.69
Homer3Q99JP6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Homer3Q99JP6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Homer3Q99JP6 Golph3-205ENSMUST00000228671 2842 ntBASIC19.38■□□□□ 0.69
Homer3Q99JP6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Homer3Q99JP6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Homer3Q99JP6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Homer3Q99JP6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Homer3Q99JP6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Homer3Q99JP6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.38■□□□□ 0.69
Homer3Q99JP6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Homer3Q99JP6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Homer3Q99JP6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Homer3Q99JP6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
Homer3Q99JP6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Homer3Q99JP6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Homer3Q99JP6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.37■□□□□ 0.69
Homer3Q99JP6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.37■□□□□ 0.69
Homer3Q99JP6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Homer3Q99JP6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Homer3Q99JP6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.36■□□□□ 0.69
Homer3Q99JP6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Homer3Q99JP6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Homer3Q99JP6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Homer3Q99JP6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.36■□□□□ 0.69
Homer3Q99JP6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.36■□□□□ 0.69
Homer3Q99JP6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Homer3Q99JP6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Homer3Q99JP6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Homer3Q99JP6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Homer3Q99JP6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Homer3Q99JP6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Homer3Q99JP6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Homer3Q99JP6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Homer3Q99JP6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Homer3Q99JP6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Homer3Q99JP6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Homer3Q99JP6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Homer3Q99JP6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Homer3Q99JP6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Homer3Q99JP6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.35■□□□□ 0.69
Homer3Q99JP6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Homer3Q99JP6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Homer3Q99JP6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Homer3Q99JP6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Homer3Q99JP6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Homer3Q99JP6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Homer3Q99JP6 Etf1-202ENSMUST00000180351 108 ntBASIC19.34■□□□□ 0.69
Homer3Q99JP6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.34■□□□□ 0.69
Homer3Q99JP6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Homer3Q99JP6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Homer3Q99JP6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.34■□□□□ 0.69
Homer3Q99JP6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Homer3Q99JP6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Homer3Q99JP6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Homer3Q99JP6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Homer3Q99JP6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Homer3Q99JP6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Homer3Q99JP6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms