Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SLC46A1Q96NT5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC46A1Q96NT5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SLC46A1Q96NT5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.1■□□□□ 0.97
SLC46A1Q96NT5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC46A1Q96NT5 RAP2CP1-201ENST00000605103 478 ntBASIC21.1■□□□□ 0.97
SLC46A1Q96NT5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.1■□□□□ 0.97
SLC46A1Q96NT5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.1■□□□□ 0.97
SLC46A1Q96NT5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC46A1Q96NT5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC46A1Q96NT5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC46A1Q96NT5 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC46A1Q96NT5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.09■□□□□ 0.97
SLC46A1Q96NT5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SLC46A1Q96NT5 AC016769.1-201ENST00000409132 1010 ntBASIC21.09■□□□□ 0.97
SLC46A1Q96NT5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.09■□□□□ 0.97
SLC46A1Q96NT5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SLC46A1Q96NT5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SLC46A1Q96NT5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.09■□□□□ 0.97
SLC46A1Q96NT5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.09■□□□□ 0.97
SLC46A1Q96NT5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC46A1Q96NT5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC46A1Q96NT5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.08■□□□□ 0.97
SLC46A1Q96NT5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SLC46A1Q96NT5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.08■□□□□ 0.97
SLC46A1Q96NT5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC46A1Q96NT5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SLC46A1Q96NT5 CDCA4P2-201ENST00000441182 718 ntBASIC21.08■□□□□ 0.97
SLC46A1Q96NT5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SLC46A1Q96NT5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SLC46A1Q96NT5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.08■□□□□ 0.97
SLC46A1Q96NT5 AC137761.2-201ENST00000561729 223 ntBASIC21.08■□□□□ 0.97
SLC46A1Q96NT5 AC145350.3-201ENST00000569033 163 ntBASIC21.08■□□□□ 0.97
SLC46A1Q96NT5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.08■□□□□ 0.97
SLC46A1Q96NT5 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.08■□□□□ 0.96
SLC46A1Q96NT5 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SLC46A1Q96NT5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SLC46A1Q96NT5 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.08■□□□□ 0.96
SLC46A1Q96NT5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 KRT18P61-201ENST00000585825 1298 ntBASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 LINC01529-204ENST00000636474 1715 ntBASIC21.07■□□□□ 0.96
SLC46A1Q96NT5 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC46A1Q96NT5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC46A1Q96NT5 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC46A1Q96NT5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.06■□□□□ 0.96
SLC46A1Q96NT5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.06■□□□□ 0.96
SLC46A1Q96NT5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC46A1Q96NT5 AC073111.5-205ENST00000641717 521 ntBASIC21.06■□□□□ 0.96
SLC46A1Q96NT5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC46A1Q96NT5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC46A1Q96NT5 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC46A1Q96NT5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC46A1Q96NT5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.05■□□□□ 0.96
SLC46A1Q96NT5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.05■□□□□ 0.96
SLC46A1Q96NT5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.05■□□□□ 0.96
SLC46A1Q96NT5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC46A1Q96NT5 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC46A1Q96NT5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC46A1Q96NT5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC46A1Q96NT5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC46A1Q96NT5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC46A1Q96NT5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.04■□□□□ 0.96
SLC46A1Q96NT5 TPRG1LP1-201ENST00000598702 760 ntBASIC21.04■□□□□ 0.96
SLC46A1Q96NT5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.04■□□□□ 0.96
SLC46A1Q96NT5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC46A1Q96NT5 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC46A1Q96NT5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC46A1Q96NT5 AC144652.1-201ENST00000609974 1624 ntBASIC21.04■□□□□ 0.96
SLC46A1Q96NT5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.04■□□□□ 0.96
SLC46A1Q96NT5 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC46A1Q96NT5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC46A1Q96NT5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.03■□□□□ 0.96
SLC46A1Q96NT5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SLC46A1Q96NT5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC46A1Q96NT5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.03■□□□□ 0.96
SLC46A1Q96NT5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC46A1Q96NT5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms