Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rd3Q8BRE0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Rd3Q8BRE0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rd3Q8BRE0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rd3Q8BRE0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rd3Q8BRE0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.77■□□□□ 0.92
Rd3Q8BRE0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Rd3Q8BRE0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rd3Q8BRE0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rd3Q8BRE0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rd3Q8BRE0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.77■□□□□ 0.91
Rd3Q8BRE0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.76■□□□□ 0.91
Rd3Q8BRE0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rd3Q8BRE0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rd3Q8BRE0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rd3Q8BRE0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.75■□□□□ 0.91
Rd3Q8BRE0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rd3Q8BRE0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rd3Q8BRE0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rd3Q8BRE0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rd3Q8BRE0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rd3Q8BRE0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rd3Q8BRE0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.74■□□□□ 0.91
Rd3Q8BRE0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.74■□□□□ 0.91
Rd3Q8BRE0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rd3Q8BRE0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rd3Q8BRE0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.74■□□□□ 0.91
Rd3Q8BRE0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rd3Q8BRE0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rd3Q8BRE0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rd3Q8BRE0 Gm12933-201ENSMUST00000120203 872 ntBASIC20.73■□□□□ 0.91
Rd3Q8BRE0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rd3Q8BRE0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rd3Q8BRE0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Rd3Q8BRE0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rd3Q8BRE0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rd3Q8BRE0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rd3Q8BRE0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rd3Q8BRE0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rd3Q8BRE0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rd3Q8BRE0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rd3Q8BRE0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Rd3Q8BRE0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Rd3Q8BRE0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rd3Q8BRE0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rd3Q8BRE0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rd3Q8BRE0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rd3Q8BRE0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rd3Q8BRE0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rd3Q8BRE0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rd3Q8BRE0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rd3Q8BRE0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rd3Q8BRE0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rd3Q8BRE0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rd3Q8BRE0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rd3Q8BRE0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.71■□□□□ 0.91
Rd3Q8BRE0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rd3Q8BRE0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.71■□□□□ 0.91
Rd3Q8BRE0 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.71■□□□□ 0.91
Rd3Q8BRE0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rd3Q8BRE0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rd3Q8BRE0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Rd3Q8BRE0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Rd3Q8BRE0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rd3Q8BRE0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rd3Q8BRE0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rd3Q8BRE0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rd3Q8BRE0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rd3Q8BRE0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.7■□□□□ 0.9
Rd3Q8BRE0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rd3Q8BRE0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rd3Q8BRE0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rd3Q8BRE0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rd3Q8BRE0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rd3Q8BRE0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rd3Q8BRE0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rd3Q8BRE0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.69■□□□□ 0.9
Rd3Q8BRE0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.69■□□□□ 0.9
Rd3Q8BRE0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rd3Q8BRE0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.69■□□□□ 0.9
Rd3Q8BRE0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rd3Q8BRE0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.69■□□□□ 0.9
Rd3Q8BRE0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rd3Q8BRE0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rd3Q8BRE0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rd3Q8BRE0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rd3Q8BRE0 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.68■□□□□ 0.9
Rd3Q8BRE0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.68■□□□□ 0.9
Rd3Q8BRE0 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.68■□□□□ 0.9
Rd3Q8BRE0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rd3Q8BRE0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.68■□□□□ 0.9
Rd3Q8BRE0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rd3Q8BRE0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rd3Q8BRE0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rd3Q8BRE0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rd3Q8BRE0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rd3Q8BRE0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rd3Q8BRE0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rd3Q8BRE0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rd3Q8BRE0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms