Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf38Q8BI21 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf38Q8BI21 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rnf38Q8BI21 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf38Q8BI21 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf38Q8BI21 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf38Q8BI21 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rnf38Q8BI21 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf38Q8BI21 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf38Q8BI21 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf38Q8BI21 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rnf38Q8BI21 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf38Q8BI21 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.83■□□□□ 0.6
Rnf38Q8BI21 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Rnf38Q8BI21 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rnf38Q8BI21 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
Rnf38Q8BI21 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf38Q8BI21 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf38Q8BI21 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf38Q8BI21 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rnf38Q8BI21 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.82■□□□□ 0.6
Rnf38Q8BI21 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.82■□□□□ 0.6
Rnf38Q8BI21 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.81■□□□□ 0.6
Rnf38Q8BI21 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf38Q8BI21 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rnf38Q8BI21 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rnf38Q8BI21 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.81■□□□□ 0.6
Rnf38Q8BI21 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf38Q8BI21 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Rnf38Q8BI21 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rnf38Q8BI21 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.81■□□□□ 0.6
Rnf38Q8BI21 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.81■□□□□ 0.6
Rnf38Q8BI21 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf38Q8BI21 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf38Q8BI21 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rnf38Q8BI21 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rnf38Q8BI21 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf38Q8BI21 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf38Q8BI21 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf38Q8BI21 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf38Q8BI21 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf38Q8BI21 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf38Q8BI21 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf38Q8BI21 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.8■□□□□ 0.6
Rnf38Q8BI21 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.8■□□□□ 0.6
Rnf38Q8BI21 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.8■□□□□ 0.6
Rnf38Q8BI21 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf38Q8BI21 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf38Q8BI21 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf38Q8BI21 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rnf38Q8BI21 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf38Q8BI21 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf38Q8BI21 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Rnf38Q8BI21 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Rnf38Q8BI21 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.79■□□□□ 0.6
Rnf38Q8BI21 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf38Q8BI21 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rnf38Q8BI21 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.79■□□□□ 0.6
Rnf38Q8BI21 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf38Q8BI21 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf38Q8BI21 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rnf38Q8BI21 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rnf38Q8BI21 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rnf38Q8BI21 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf38Q8BI21 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf38Q8BI21 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.78■□□□□ 0.6
Rnf38Q8BI21 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Rnf38Q8BI21 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Rnf38Q8BI21 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf38Q8BI21 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf38Q8BI21 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Rnf38Q8BI21 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf38Q8BI21 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf38Q8BI21 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf38Q8BI21 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rnf38Q8BI21 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf38Q8BI21 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf38Q8BI21 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.77■□□□□ 0.6
Rnf38Q8BI21 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf38Q8BI21 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
Rnf38Q8BI21 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.77■□□□□ 0.6
Rnf38Q8BI21 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf38Q8BI21 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf38Q8BI21 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.77■□□□□ 0.6
Rnf38Q8BI21 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf38Q8BI21 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rnf38Q8BI21 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rnf38Q8BI21 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Rnf38Q8BI21 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rnf38Q8BI21 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rnf38Q8BI21 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf38Q8BI21 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Rnf38Q8BI21 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf38Q8BI21 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf38Q8BI21 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.76■□□□□ 0.59
Rnf38Q8BI21 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf38Q8BI21 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf38Q8BI21 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rnf38Q8BI21 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Rnf38Q8BI21 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms