Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smn1P97801 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smn1P97801 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smn1P97801 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smn1P97801 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smn1P97801 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smn1P97801 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Smn1P97801 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Smn1P97801 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smn1P97801 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Smn1P97801 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.71■□□□□ 0.27
Smn1P97801 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smn1P97801 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.71■□□□□ 0.27
Smn1P97801 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smn1P97801 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smn1P97801 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Smn1P97801 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Smn1P97801 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smn1P97801 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smn1P97801 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smn1P97801 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smn1P97801 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Smn1P97801 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Smn1P97801 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smn1P97801 Mir6236-201ENSMUST00000184437 123 ntBASIC16.7■□□□□ 0.26
Smn1P97801 Gm5921-201ENSMUST00000075898 882 ntBASIC16.7■□□□□ 0.26
Smn1P97801 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Smn1P97801 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smn1P97801 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smn1P97801 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.7■□□□□ 0.26
Smn1P97801 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smn1P97801 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Smn1P97801 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smn1P97801 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.7■□□□□ 0.26
Smn1P97801 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smn1P97801 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smn1P97801 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Smn1P97801 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smn1P97801 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smn1P97801 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.69■□□□□ 0.26
Smn1P97801 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smn1P97801 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smn1P97801 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smn1P97801 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smn1P97801 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smn1P97801 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smn1P97801 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smn1P97801 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smn1P97801 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smn1P97801 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smn1P97801 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Smn1P97801 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smn1P97801 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smn1P97801 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smn1P97801 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.68■□□□□ 0.26
Smn1P97801 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Smn1P97801 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smn1P97801 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smn1P97801 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Smn1P97801 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smn1P97801 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.68■□□□□ 0.26
Smn1P97801 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smn1P97801 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smn1P97801 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smn1P97801 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smn1P97801 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Smn1P97801 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smn1P97801 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Smn1P97801 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smn1P97801 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smn1P97801 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Smn1P97801 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smn1P97801 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smn1P97801 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smn1P97801 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smn1P97801 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smn1P97801 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.66■□□□□ 0.26
Smn1P97801 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Smn1P97801 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smn1P97801 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smn1P97801 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.65■□□□□ 0.26
Smn1P97801 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Smn1P97801 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smn1P97801 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smn1P97801 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smn1P97801 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smn1P97801 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.65■□□□□ 0.26
Smn1P97801 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smn1P97801 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Smn1P97801 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Smn1P97801 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Smn1P97801 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smn1P97801 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smn1P97801 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smn1P97801 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Smn1P97801 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smn1P97801 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smn1P97801 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.65■□□□□ 0.26
Smn1P97801 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smn1P97801 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms