Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Xcl1P47993 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Xcl1P47993 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Xcl1P47993 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Xcl1P47993 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Xcl1P47993 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Xcl1P47993 Gm35558-201ENSMUST00000222675 2219 ntBASIC12.85□□□□□ -0.35
Xcl1P47993 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
Xcl1P47993 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Xcl1P47993 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Xcl1P47993 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Xcl1P47993 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xcl1P47993 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.84□□□□□ -0.35
Xcl1P47993 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.84□□□□□ -0.35
Xcl1P47993 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Xcl1P47993 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xcl1P47993 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Xcl1P47993 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xcl1P47993 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xcl1P47993 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Xcl1P47993 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xcl1P47993 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Xcl1P47993 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xcl1P47993 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Xcl1P47993 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xcl1P47993 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Xcl1P47993 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xcl1P47993 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xcl1P47993 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Xcl1P47993 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Xcl1P47993 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xcl1P47993 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xcl1P47993 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xcl1P47993 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Xcl1P47993 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Xcl1P47993 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
Xcl1P47993 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Xcl1P47993 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xcl1P47993 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Xcl1P47993 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Xcl1P47993 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xcl1P47993 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Xcl1P47993 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Xcl1P47993 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xcl1P47993 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xcl1P47993 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xcl1P47993 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Xcl1P47993 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xcl1P47993 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Xcl1P47993 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xcl1P47993 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xcl1P47993 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xcl1P47993 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Xcl1P47993 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Xcl1P47993 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Xcl1P47993 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Xcl1P47993 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Xcl1P47993 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Xcl1P47993 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Xcl1P47993 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Xcl1P47993 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Xcl1P47993 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Xcl1P47993 AC122428.2-201ENSMUST00000216321 1832 ntBASIC12.82□□□□□ -0.36
Xcl1P47993 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Xcl1P47993 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Xcl1P47993 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC12.82□□□□□ -0.36
Xcl1P47993 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Xcl1P47993 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.82□□□□□ -0.36
Xcl1P47993 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Xcl1P47993 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Xcl1P47993 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Xcl1P47993 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Xcl1P47993 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xcl1P47993 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xcl1P47993 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC12.81□□□□□ -0.36
Xcl1P47993 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Xcl1P47993 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xcl1P47993 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Xcl1P47993 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xcl1P47993 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xcl1P47993 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xcl1P47993 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xcl1P47993 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC12.8□□□□□ -0.36
Xcl1P47993 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xcl1P47993 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xcl1P47993 Grk6-206ENSMUST00000224995 2971 ntBASIC12.8□□□□□ -0.36
Xcl1P47993 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Xcl1P47993 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Xcl1P47993 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.8□□□□□ -0.36
Xcl1P47993 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Xcl1P47993 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Xcl1P47993 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xcl1P47993 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xcl1P47993 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Xcl1P47993 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Xcl1P47993 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Xcl1P47993 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Xcl1P47993 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Xcl1P47993 Gm45141-201ENSMUST00000206502 1888 ntBASIC12.79□□□□□ -0.36
Xcl1P47993 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms