Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nckap1P28660 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Nckap1P28660 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nckap1P28660 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nckap1P28660 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nckap1P28660 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nckap1P28660 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nckap1P28660 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nckap1P28660 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nckap1P28660 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nckap1P28660 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nckap1P28660 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.45■□□□□ 0.7
Nckap1P28660 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Nckap1P28660 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nckap1P28660 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.45■□□□□ 0.7
Nckap1P28660 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nckap1P28660 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nckap1P28660 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nckap1P28660 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Nckap1P28660 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nckap1P28660 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nckap1P28660 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.44■□□□□ 0.7
Nckap1P28660 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nckap1P28660 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nckap1P28660 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.44■□□□□ 0.7
Nckap1P28660 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nckap1P28660 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.44■□□□□ 0.7
Nckap1P28660 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nckap1P28660 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nckap1P28660 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nckap1P28660 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nckap1P28660 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nckap1P28660 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nckap1P28660 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nckap1P28660 Reep4-203ENSMUST00000226563 1444 ntBASIC19.43■□□□□ 0.7
Nckap1P28660 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nckap1P28660 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nckap1P28660 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nckap1P28660 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nckap1P28660 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nckap1P28660 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.43■□□□□ 0.7
Nckap1P28660 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nckap1P28660 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nckap1P28660 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nckap1P28660 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nckap1P28660 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nckap1P28660 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nckap1P28660 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nckap1P28660 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nckap1P28660 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.42■□□□□ 0.7
Nckap1P28660 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nckap1P28660 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nckap1P28660 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nckap1P28660 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.41■□□□□ 0.7
Nckap1P28660 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Nckap1P28660 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.41■□□□□ 0.7
Nckap1P28660 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.41■□□□□ 0.7
Nckap1P28660 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nckap1P28660 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.41■□□□□ 0.7
Nckap1P28660 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nckap1P28660 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nckap1P28660 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nckap1P28660 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Nckap1P28660 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.4■□□□□ 0.7
Nckap1P28660 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nckap1P28660 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nckap1P28660 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nckap1P28660 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nckap1P28660 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nckap1P28660 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nckap1P28660 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nckap1P28660 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
Nckap1P28660 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Nckap1P28660 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Nckap1P28660 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nckap1P28660 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nckap1P28660 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nckap1P28660 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nckap1P28660 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nckap1P28660 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Nckap1P28660 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nckap1P28660 Gm10602-201ENSMUST00000098239 609 ntBASIC19.38■□□□□ 0.69
Nckap1P28660 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nckap1P28660 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Nckap1P28660 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nckap1P28660 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nckap1P28660 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nckap1P28660 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Nckap1P28660 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.37■□□□□ 0.69
Nckap1P28660 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Nckap1P28660 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.37■□□□□ 0.69
Nckap1P28660 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Nckap1P28660 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nckap1P28660 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nckap1P28660 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nckap1P28660 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nckap1P28660 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nckap1P28660 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Nckap1P28660 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.36■□□□□ 0.69
Nckap1P28660 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms