Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd48P18181 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cd48P18181 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd48P18181 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd48P18181 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd48P18181 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.47■□□□□ 0.39
Cd48P18181 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd48P18181 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd48P18181 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Cd48P18181 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd48P18181 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd48P18181 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd48P18181 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd48P18181 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd48P18181 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd48P18181 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.47■□□□□ 0.39
Cd48P18181 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd48P18181 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cd48P18181 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cd48P18181 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd48P18181 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd48P18181 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd48P18181 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd48P18181 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd48P18181 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cd48P18181 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Cd48P18181 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd48P18181 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd48P18181 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cd48P18181 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd48P18181 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.46■□□□□ 0.39
Cd48P18181 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd48P18181 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cd48P18181 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cd48P18181 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd48P18181 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd48P18181 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd48P18181 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
Cd48P18181 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Cd48P18181 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.45■□□□□ 0.38
Cd48P18181 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Cd48P18181 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cd48P18181 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd48P18181 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Cd48P18181 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd48P18181 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd48P18181 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd48P18181 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Cd48P18181 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd48P18181 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd48P18181 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd48P18181 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd48P18181 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.44■□□□□ 0.38
Cd48P18181 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd48P18181 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd48P18181 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd48P18181 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cd48P18181 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cd48P18181 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cd48P18181 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cd48P18181 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cd48P18181 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.43■□□□□ 0.38
Cd48P18181 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.43■□□□□ 0.38
Cd48P18181 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd48P18181 Gm9959-201ENSMUST00000068277 390 ntBASIC17.43■□□□□ 0.38
Cd48P18181 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd48P18181 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd48P18181 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd48P18181 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd48P18181 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Cd48P18181 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd48P18181 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cd48P18181 Gm22238-201ENSMUST00000175222 88 ntBASIC17.42■□□□□ 0.38
Cd48P18181 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.42■□□□□ 0.38
Cd48P18181 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd48P18181 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.42■□□□□ 0.38
Cd48P18181 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd48P18181 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd48P18181 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cd48P18181 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.41■□□□□ 0.38
Cd48P18181 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd48P18181 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cd48P18181 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd48P18181 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd48P18181 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd48P18181 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd48P18181 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd48P18181 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd48P18181 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd48P18181 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd48P18181 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd48P18181 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd48P18181 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cd48P18181 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cd48P18181 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd48P18181 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd48P18181 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.39■□□□□ 0.37
Cd48P18181 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd48P18181 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd48P18181 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms