Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 YBL036CYBL036C 774 nt3.37□□□□□ -1.87
RPL40BP0CH09 NUP159YIL115C 4383 nt3.37□□□□□ -1.87
RPL40BP0CH09 STB2YMR053C 2553 nt3.37□□□□□ -1.87
RPL40BP0CH09 PFK1YGR240C 2964 nt3.36□□□□□ -1.87
RPL40BP0CH09 UBP7YIL156W 3216 nt3.36□□□□□ -1.87
RPL40BP0CH09 DCV1YFR012W 609 nt3.36□□□□□ -1.87
RPL40BP0CH09 REX4YOL080C 870 nt3.36□□□□□ -1.87
RPL40BP0CH09 MRPL51YPR100W 423 nt3.36□□□□□ -1.87
RPL40BP0CH09 MCP2YLR253W 1710 nt3.36□□□□□ -1.87
RPL40BP0CH09 VPS36YLR417W 1701 nt3.36□□□□□ -1.87
RPL40BP0CH09 YGL140CYGL140C 3660 nt3.35□□□□□ -1.87
RPL40BP0CH09 RPN2YIL075C 2838 nt3.35□□□□□ -1.87
RPL40BP0CH09 RPB3YIL021W 957 nt3.35□□□□□ -1.87
RPL40BP0CH09 EMP70YLR083C 2004 nt3.35□□□□□ -1.87
RPL40BP0CH09 YDR444WYDR444W 2064 nt3.35□□□□□ -1.87
RPL40BP0CH09 RRN7YJL025W 1545 nt3.34□□□□□ -1.87
RPL40BP0CH09 EKI1YDR147W 1605 nt3.34□□□□□ -1.87
RPL40BP0CH09 FAA1YOR317W 2103 nt3.34□□□□□ -1.87
RPL40BP0CH09 RNR1YER070W 2667 nt3.34□□□□□ -1.87
RPL40BP0CH09 YER134CYER134C 537 nt3.34□□□□□ -1.87
RPL40BP0CH09 tK(UUU)DtK(UUU)D 73 nt3.34□□□□□ -1.87
RPL40BP0CH09 tK(UUU)G1tK(UUU)G1 73 nt3.34□□□□□ -1.87
RPL40BP0CH09 tK(UUU)G2tK(UUU)G2 73 nt3.34□□□□□ -1.87
RPL40BP0CH09 tK(UUU)KtK(UUU)K 73 nt3.34□□□□□ -1.87
RPL40BP0CH09 tK(UUU)LtK(UUU)L 73 nt3.34□□□□□ -1.87
RPL40BP0CH09 tK(UUU)OtK(UUU)O 73 nt3.34□□□□□ -1.87
RPL40BP0CH09 tK(UUU)PtK(UUU)P 73 nt3.34□□□□□ -1.87
RPL40BP0CH09 COQ5YML110C 924 nt3.34□□□□□ -1.87
RPL40BP0CH09 SIS2YKR072C 1689 nt3.33□□□□□ -1.88
RPL40BP0CH09 VPS45YGL095C 1734 nt3.33□□□□□ -1.88
RPL40BP0CH09 TRM8YDL201W 861 nt3.33□□□□□ -1.88
RPL40BP0CH09 HOM2YDR158W 1098 nt3.33□□□□□ -1.88
RPL40BP0CH09 SEC53YFL045C 765 nt3.33□□□□□ -1.88
RPL40BP0CH09 RTA1YGR213C 954 nt3.33□□□□□ -1.88
RPL40BP0CH09 TMA19YKL056C 504 nt3.33□□□□□ -1.88
RPL40BP0CH09 POF1YCL047C 777 nt3.33□□□□□ -1.88
RPL40BP0CH09 SLI1YGR212W 1407 nt3.33□□□□□ -1.88
RPL40BP0CH09 TRE1YPL176C 2352 nt3.33□□□□□ -1.88
RPL40BP0CH09 ERG5YMR015C 1617 nt3.33□□□□□ -1.88
RPL40BP0CH09 BUB1YGR188C 3066 nt3.32□□□□□ -1.88
RPL40BP0CH09 ASP1YDR321W 1146 nt3.32□□□□□ -1.88
RPL40BP0CH09 YGL074CYGL074C 327 nt3.32□□□□□ -1.88
RPL40BP0CH09 YGR139WYGR139W 339 nt3.32□□□□□ -1.88
RPL40BP0CH09 YHR052W-AYHR052W-A 195 nt3.32□□□□□ -1.88
RPL40BP0CH09 YHR054W-AYHR054W-A 195 nt3.32□□□□□ -1.88
RPL40BP0CH09 FAF1YIL019W 1041 nt3.32□□□□□ -1.88
RPL40BP0CH09 YKR070WYKR070W 1059 nt3.32□□□□□ -1.88
RPL40BP0CH09 ECM4YKR076W 1113 nt3.32□□□□□ -1.88
RPL40BP0CH09 RDS1YCR106W 2499 nt3.32□□□□□ -1.88
RPL40BP0CH09 NAM2YLR382C 2685 nt3.31□□□□□ -1.88
RPL40BP0CH09 GPI10YGL142C 1851 nt3.31□□□□□ -1.88
RPL40BP0CH09 MEK1YOR351C 1494 nt3.31□□□□□ -1.88
RPL40BP0CH09 KIN28YDL108W 921 nt3.31□□□□□ -1.88
RPL40BP0CH09 YER133W-AYER133W-A 342 nt3.31□□□□□ -1.88
RPL40BP0CH09 YIL014C-AYIL014C-A 315 nt3.31□□□□□ -1.88
RPL40BP0CH09 RPL8BYLL045C 771 nt3.31□□□□□ -1.88
RPL40BP0CH09 RFC3YNL290W 1023 nt3.31□□□□□ -1.88
RPL40BP0CH09 MED4YOR174W 855 nt3.31□□□□□ -1.88
RPL40BP0CH09 YOR283WYOR283W 693 nt3.31□□□□□ -1.88
RPL40BP0CH09 OSH3YHR073W 2991 nt3.31□□□□□ -1.88
RPL40BP0CH09 SLA1YBL007C 3735 nt3.31□□□□□ -1.88
RPL40BP0CH09 IFM1YOL023W 2031 nt3.31□□□□□ -1.88
RPL40BP0CH09 FAT1YBR041W 2010 nt3.31□□□□□ -1.88
RPL40BP0CH09 YNR063WYNR063W 1824 nt3.3□□□□□ -1.88
RPL40BP0CH09 MNT4YNR059W 1743 nt3.3□□□□□ -1.88
RPL40BP0CH09 GUP1YGL084C 1683 nt3.3□□□□□ -1.88
RPL40BP0CH09 RRN6YBL014C 2685 nt3.3□□□□□ -1.88
RPL40BP0CH09 YBR139WYBR139W 1527 nt3.3□□□□□ -1.88
RPL40BP0CH09 STU1YBL034C 4542 nt3.3□□□□□ -1.88
RPL40BP0CH09 HER2YMR293C 1395 nt3.3□□□□□ -1.88
RPL40BP0CH09 FAD1YDL045C 921 nt3.3□□□□□ -1.88
RPL40BP0CH09 COX23YHR116W 456 nt3.3□□□□□ -1.88
RPL40BP0CH09 MRPS9YBR146W 837 nt3.3□□□□□ -1.88
RPL40BP0CH09 STE6YKL209C 3873 nt3.3□□□□□ -1.88
RPL40BP0CH09 YPR003CYPR003C 2265 nt3.3□□□□□ -1.88
RPL40BP0CH09 APE2YKL157W 2859 nt3.3□□□□□ -1.88
RPL40BP0CH09 NUP133YKR082W 3474 nt3.29□□□□□ -1.88
RPL40BP0CH09 HMG1YML075C 3165 nt3.29□□□□□ -1.88
RPL40BP0CH09 XRS2YDR369C 2565 nt3.29□□□□□ -1.88
RPL40BP0CH09 RAD2YGR258C 3096 nt3.29□□□□□ -1.88
RPL40BP0CH09 CUE3YGL110C 1875 nt3.29□□□□□ -1.88
RPL40BP0CH09 SAS10YDL153C 1833 nt3.29□□□□□ -1.88
RPL40BP0CH09 DTD1YDL219W 453 nt3.29□□□□□ -1.88
RPL40BP0CH09 SRG1SRG1 551 nt3.29□□□□□ -1.88
RPL40BP0CH09 YDR274CYDR274C 372 nt3.29□□□□□ -1.88
RPL40BP0CH09 WSS1YHR134W 810 nt3.29□□□□□ -1.88
RPL40BP0CH09 PAU17YLL025W 375 nt3.29□□□□□ -1.88
RPL40BP0CH09 YLR156WYLR156W 345 nt3.29□□□□□ -1.88
RPL40BP0CH09 YLR159WYLR159W 345 nt3.29□□□□□ -1.88
RPL40BP0CH09 YLR161WYLR161W 345 nt3.29□□□□□ -1.88
RPL40BP0CH09 TMA10YLR327C 261 nt3.29□□□□□ -1.88
RPL40BP0CH09 SPS18YNL204C 903 nt3.29□□□□□ -1.88
RPL40BP0CH09 SHQ1YIL104C 1524 nt3.29□□□□□ -1.88
RPL40BP0CH09 PRP19YLL036C 1512 nt3.29□□□□□ -1.88
RPL40BP0CH09 OAF1YAL051W 3144 nt3.28□□□□□ -1.88
RPL40BP0CH09 MRPL11YDL202W 750 nt3.28□□□□□ -1.88
RPL40BP0CH09 YHR069C-AYHR069C-A 363 nt3.28□□□□□ -1.88
RPL40BP0CH09 RPL15AYLR029C 615 nt3.28□□□□□ -1.88
RPL40BP0CH09 MRPL16YBL038W 699 nt3.28□□□□□ -1.88
RPL40BP0CH09 YPL114WYPL114W 420 nt3.28□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 28.1 ms