Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cxcl13O55038 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cxcl13O55038 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cxcl13O55038 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cxcl13O55038 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cxcl13O55038 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Cxcl13O55038 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl13O55038 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cxcl13O55038 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl13O55038 Gm13234-201ENSMUST00000120010 747 ntBASIC16.6■□□□□ 0.25
Cxcl13O55038 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.6■□□□□ 0.25
Cxcl13O55038 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl13O55038 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl13O55038 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl13O55038 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cxcl13O55038 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cxcl13O55038 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Cxcl13O55038 Gm29257-201ENSMUST00000186115 639 ntBASIC16.59■□□□□ 0.25
Cxcl13O55038 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.59■□□□□ 0.25
Cxcl13O55038 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.59■□□□□ 0.25
Cxcl13O55038 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.59■□□□□ 0.25
Cxcl13O55038 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cxcl13O55038 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cxcl13O55038 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cxcl13O55038 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cxcl13O55038 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cxcl13O55038 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cxcl13O55038 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cxcl13O55038 Gm37179-201ENSMUST00000194862 823 ntBASIC16.58■□□□□ 0.24
Cxcl13O55038 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.58■□□□□ 0.24
Cxcl13O55038 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cxcl13O55038 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cxcl13O55038 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.58■□□□□ 0.24
Cxcl13O55038 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cxcl13O55038 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cxcl13O55038 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cxcl13O55038 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.57■□□□□ 0.24
Cxcl13O55038 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cxcl13O55038 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cxcl13O55038 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cxcl13O55038 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cxcl13O55038 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cxcl13O55038 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cxcl13O55038 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.57■□□□□ 0.24
Cxcl13O55038 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cxcl13O55038 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.57■□□□□ 0.24
Cxcl13O55038 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cxcl13O55038 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cxcl13O55038 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cxcl13O55038 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cxcl13O55038 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cxcl13O55038 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cxcl13O55038 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.56■□□□□ 0.24
Cxcl13O55038 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.56■□□□□ 0.24
Cxcl13O55038 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cxcl13O55038 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cxcl13O55038 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.56■□□□□ 0.24
Cxcl13O55038 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
Cxcl13O55038 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cxcl13O55038 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.55■□□□□ 0.24
Cxcl13O55038 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cxcl13O55038 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cxcl13O55038 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cxcl13O55038 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cxcl13O55038 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cxcl13O55038 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.54■□□□□ 0.24
Cxcl13O55038 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl13O55038 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cxcl13O55038 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl13O55038 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.54■□□□□ 0.24
Cxcl13O55038 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.54■□□□□ 0.24
Cxcl13O55038 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.54■□□□□ 0.24
Cxcl13O55038 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.54■□□□□ 0.24
Cxcl13O55038 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cxcl13O55038 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.54■□□□□ 0.24
Cxcl13O55038 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl13O55038 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cxcl13O55038 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cxcl13O55038 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cxcl13O55038 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl13O55038 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.53■□□□□ 0.24
Cxcl13O55038 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl13O55038 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl13O55038 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Cxcl13O55038 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl13O55038 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cxcl13O55038 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl13O55038 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.53■□□□□ 0.24
Cxcl13O55038 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cxcl13O55038 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl13O55038 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cxcl13O55038 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cxcl13O55038 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cxcl13O55038 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.52■□□□□ 0.24
Cxcl13O55038 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cxcl13O55038 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cxcl13O55038 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.52■□□□□ 0.24
Cxcl13O55038 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.52■□□□□ 0.24
Cxcl13O55038 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.52■□□□□ 0.24
Cxcl13O55038 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms