Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trove2O08848 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.94■□□□□ 0.78
Trove2O08848 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trove2O08848 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trove2O08848 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trove2O08848 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trove2O08848 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trove2O08848 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trove2O08848 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trove2O08848 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.93■□□□□ 0.78
Trove2O08848 Golph3-205ENSMUST00000228671 2842 ntBASIC19.93■□□□□ 0.78
Trove2O08848 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trove2O08848 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trove2O08848 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
Trove2O08848 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trove2O08848 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trove2O08848 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trove2O08848 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.92■□□□□ 0.78
Trove2O08848 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trove2O08848 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trove2O08848 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trove2O08848 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trove2O08848 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trove2O08848 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trove2O08848 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Trove2O08848 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trove2O08848 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trove2O08848 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trove2O08848 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.91■□□□□ 0.78
Trove2O08848 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trove2O08848 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trove2O08848 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trove2O08848 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
Trove2O08848 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.91■□□□□ 0.78
Trove2O08848 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trove2O08848 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Trove2O08848 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Trove2O08848 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trove2O08848 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trove2O08848 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.9■□□□□ 0.78
Trove2O08848 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trove2O08848 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trove2O08848 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.9■□□□□ 0.78
Trove2O08848 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trove2O08848 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trove2O08848 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trove2O08848 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trove2O08848 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trove2O08848 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trove2O08848 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trove2O08848 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trove2O08848 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
Trove2O08848 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trove2O08848 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
Trove2O08848 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.89■□□□□ 0.77
Trove2O08848 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trove2O08848 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trove2O08848 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trove2O08848 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trove2O08848 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trove2O08848 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trove2O08848 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trove2O08848 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trove2O08848 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trove2O08848 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trove2O08848 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Trove2O08848 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trove2O08848 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trove2O08848 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trove2O08848 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.88■□□□□ 0.77
Trove2O08848 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.88■□□□□ 0.77
Trove2O08848 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trove2O08848 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trove2O08848 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trove2O08848 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trove2O08848 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trove2O08848 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trove2O08848 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trove2O08848 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.88■□□□□ 0.77
Trove2O08848 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trove2O08848 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trove2O08848 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trove2O08848 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trove2O08848 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trove2O08848 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trove2O08848 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trove2O08848 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trove2O08848 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Trove2O08848 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trove2O08848 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trove2O08848 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trove2O08848 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Trove2O08848 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trove2O08848 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.86■□□□□ 0.77
Trove2O08848 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trove2O08848 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.86■□□□□ 0.77
Trove2O08848 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trove2O08848 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trove2O08848 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.85■□□□□ 0.77
Trove2O08848 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms