Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
BC035044E0CXF8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
BC035044E0CXF8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
BC035044E0CXF8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BC035044E0CXF8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BC035044E0CXF8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
BC035044E0CXF8 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.63■□□□□ 0.25
BC035044E0CXF8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
BC035044E0CXF8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BC035044E0CXF8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
BC035044E0CXF8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.63■□□□□ 0.25
BC035044E0CXF8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BC035044E0CXF8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BC035044E0CXF8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.63■□□□□ 0.25
BC035044E0CXF8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BC035044E0CXF8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.63■□□□□ 0.25
BC035044E0CXF8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BC035044E0CXF8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BC035044E0CXF8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.62■□□□□ 0.25
BC035044E0CXF8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BC035044E0CXF8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BC035044E0CXF8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BC035044E0CXF8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BC035044E0CXF8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BC035044E0CXF8 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.61■□□□□ 0.25
BC035044E0CXF8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.61■□□□□ 0.25
BC035044E0CXF8 Etf1-202ENSMUST00000180351 108 ntBASIC16.61■□□□□ 0.25
BC035044E0CXF8 Gm15820-201ENSMUST00000201566 728 ntBASIC16.61■□□□□ 0.25
BC035044E0CXF8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BC035044E0CXF8 AA386476-201ENSMUST00000098781 1665 ntBASIC16.61■□□□□ 0.25
BC035044E0CXF8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BC035044E0CXF8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BC035044E0CXF8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BC035044E0CXF8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BC035044E0CXF8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BC035044E0CXF8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.61■□□□□ 0.25
BC035044E0CXF8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.6■□□□□ 0.25
BC035044E0CXF8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BC035044E0CXF8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BC035044E0CXF8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
BC035044E0CXF8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.6■□□□□ 0.25
BC035044E0CXF8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BC035044E0CXF8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BC035044E0CXF8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BC035044E0CXF8 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.6■□□□□ 0.25
BC035044E0CXF8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BC035044E0CXF8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BC035044E0CXF8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
BC035044E0CXF8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
BC035044E0CXF8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BC035044E0CXF8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BC035044E0CXF8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
BC035044E0CXF8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
BC035044E0CXF8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BC035044E0CXF8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
BC035044E0CXF8 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.59■□□□□ 0.25
BC035044E0CXF8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BC035044E0CXF8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BC035044E0CXF8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BC035044E0CXF8 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.59■□□□□ 0.25
BC035044E0CXF8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BC035044E0CXF8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BC035044E0CXF8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
BC035044E0CXF8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BC035044E0CXF8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BC035044E0CXF8 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.59■□□□□ 0.25
BC035044E0CXF8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
BC035044E0CXF8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
BC035044E0CXF8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
BC035044E0CXF8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BC035044E0CXF8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.58■□□□□ 0.24
BC035044E0CXF8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BC035044E0CXF8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BC035044E0CXF8 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.58■□□□□ 0.24
BC035044E0CXF8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BC035044E0CXF8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BC035044E0CXF8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BC035044E0CXF8 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.58■□□□□ 0.24
BC035044E0CXF8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BC035044E0CXF8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
BC035044E0CXF8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
BC035044E0CXF8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BC035044E0CXF8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BC035044E0CXF8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
BC035044E0CXF8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BC035044E0CXF8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BC035044E0CXF8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
BC035044E0CXF8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.57■□□□□ 0.24
BC035044E0CXF8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BC035044E0CXF8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BC035044E0CXF8 Gm7417-201ENSMUST00000192950 473 ntBASIC16.57■□□□□ 0.24
BC035044E0CXF8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BC035044E0CXF8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BC035044E0CXF8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BC035044E0CXF8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
BC035044E0CXF8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BC035044E0CXF8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BC035044E0CXF8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BC035044E0CXF8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BC035044E0CXF8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms