Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12d-1A0N8R0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12d-1A0N8R0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12d-1A0N8R0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav12d-1A0N8R0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12d-1A0N8R0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12d-1A0N8R0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trav12d-1A0N8R0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12d-1A0N8R0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav12d-1A0N8R0 Golph3-205ENSMUST00000228671 2842 ntBASIC15.71■□□□□ 0.1
Trav12d-1A0N8R0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
Trav12d-1A0N8R0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12d-1A0N8R0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav12d-1A0N8R0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12d-1A0N8R0 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.7■□□□□ 0.1
Trav12d-1A0N8R0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav12d-1A0N8R0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12d-1A0N8R0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12d-1A0N8R0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12d-1A0N8R0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12d-1A0N8R0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav12d-1A0N8R0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav12d-1A0N8R0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trav12d-1A0N8R0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Trav12d-1A0N8R0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav12d-1A0N8R0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav12d-1A0N8R0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12d-1A0N8R0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.69■□□□□ 0.1
Trav12d-1A0N8R0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12d-1A0N8R0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav12d-1A0N8R0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12d-1A0N8R0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12d-1A0N8R0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12d-1A0N8R0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12d-1A0N8R0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12d-1A0N8R0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12d-1A0N8R0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav12d-1A0N8R0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12d-1A0N8R0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav12d-1A0N8R0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trav12d-1A0N8R0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav12d-1A0N8R0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.68■□□□□ 0.1
Trav12d-1A0N8R0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12d-1A0N8R0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12d-1A0N8R0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12d-1A0N8R0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12d-1A0N8R0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.68■□□□□ 0.1
Trav12d-1A0N8R0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.68■□□□□ 0.1
Trav12d-1A0N8R0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav12d-1A0N8R0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav12d-1A0N8R0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav12d-1A0N8R0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-1A0N8R0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-1A0N8R0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav12d-1A0N8R0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav12d-1A0N8R0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-1A0N8R0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-1A0N8R0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-1A0N8R0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-1A0N8R0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-1A0N8R0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-1A0N8R0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-1A0N8R0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-1A0N8R0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-1A0N8R0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-1A0N8R0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav12d-1A0N8R0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-1A0N8R0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav12d-1A0N8R0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav12d-1A0N8R0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav12d-1A0N8R0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12d-1A0N8R0 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.66■□□□□ 0.1
Trav12d-1A0N8R0 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.66■□□□□ 0.1
Trav12d-1A0N8R0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12d-1A0N8R0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Trav12d-1A0N8R0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12d-1A0N8R0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12d-1A0N8R0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12d-1A0N8R0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12d-1A0N8R0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12d-1A0N8R0 Etf1-202ENSMUST00000180351 108 ntBASIC15.66■□□□□ 0.1
Trav12d-1A0N8R0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.66■□□□□ 0.1
Trav12d-1A0N8R0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav12d-1A0N8R0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12d-1A0N8R0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav12d-1A0N8R0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav12d-1A0N8R0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav12d-1A0N8R0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Trav12d-1A0N8R0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav12d-1A0N8R0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12d-1A0N8R0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav12d-1A0N8R0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12d-1A0N8R0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12d-1A0N8R0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav12d-1A0N8R0 AA386476-201ENSMUST00000098781 1665 ntBASIC15.65■□□□□ 0.1
Trav12d-1A0N8R0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav12d-1A0N8R0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trav12d-1A0N8R0 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.65■□□□□ 0.1
Trav12d-1A0N8R0 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.65■□□□□ 0.1
Trav12d-1A0N8R0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms