Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav9d-1A0A075B699 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trav9d-1A0A075B699 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav9d-1A0A075B699 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav9d-1A0A075B699 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.05■□□□□ -0
Trav9d-1A0A075B699 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9d-1A0A075B699 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav9d-1A0A075B699 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9d-1A0A075B699 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.05■□□□□ -0
Trav9d-1A0A075B699 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav9d-1A0A075B699 Gm9959-201ENSMUST00000068277 390 ntBASIC15.05■□□□□ -0
Trav9d-1A0A075B699 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.05■□□□□ -0
Trav9d-1A0A075B699 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9d-1A0A075B699 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav9d-1A0A075B699 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9d-1A0A075B699 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Trav9d-1A0A075B699 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav9d-1A0A075B699 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9d-1A0A075B699 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9d-1A0A075B699 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9d-1A0A075B699 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9d-1A0A075B699 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9d-1A0A075B699 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9d-1A0A075B699 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9d-1A0A075B699 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav9d-1A0A075B699 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9d-1A0A075B699 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav9d-1A0A075B699 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9d-1A0A075B699 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9d-1A0A075B699 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.03■□□□□ -0
Trav9d-1A0A075B699 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.03■□□□□ -0
Trav9d-1A0A075B699 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.03■□□□□ -0
Trav9d-1A0A075B699 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9d-1A0A075B699 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9d-1A0A075B699 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9d-1A0A075B699 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.03■□□□□ -0
Trav9d-1A0A075B699 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9d-1A0A075B699 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9d-1A0A075B699 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.03■□□□□ -0
Trav9d-1A0A075B699 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav9d-1A0A075B699 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav9d-1A0A075B699 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.02■□□□□ -0
Trav9d-1A0A075B699 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav9d-1A0A075B699 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav9d-1A0A075B699 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.02■□□□□ -0
Trav9d-1A0A075B699 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.02■□□□□ -0
Trav9d-1A0A075B699 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav9d-1A0A075B699 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav9d-1A0A075B699 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Trav9d-1A0A075B699 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav9d-1A0A075B699 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav9d-1A0A075B699 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav9d-1A0A075B699 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9d-1A0A075B699 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.01□□□□□ -0.01
Trav9d-1A0A075B699 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav9d-1A0A075B699 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9d-1A0A075B699 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav9d-1A0A075B699 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9d-1A0A075B699 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9d-1A0A075B699 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.01□□□□□ -0.01
Trav9d-1A0A075B699 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9d-1A0A075B699 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9d-1A0A075B699 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9d-1A0A075B699 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9d-1A0A075B699 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9d-1A0A075B699 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav9d-1A0A075B699 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9d-1A0A075B699 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15□□□□□ -0.01
Trav9d-1A0A075B699 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Trav9d-1A0A075B699 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav9d-1A0A075B699 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
Trav9d-1A0A075B699 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9d-1A0A075B699 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav9d-1A0A075B699 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav9d-1A0A075B699 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15□□□□□ -0.01
Trav9d-1A0A075B699 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9d-1A0A075B699 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9d-1A0A075B699 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9d-1A0A075B699 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav9d-1A0A075B699 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav9d-1A0A075B699 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9d-1A0A075B699 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.99□□□□□ -0.01
Trav9d-1A0A075B699 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav9d-1A0A075B699 Gm22238-201ENSMUST00000175222 88 ntBASIC14.99□□□□□ -0.01
Trav9d-1A0A075B699 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Trav9d-1A0A075B699 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.99□□□□□ -0.01
Trav9d-1A0A075B699 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9d-1A0A075B699 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9d-1A0A075B699 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav9d-1A0A075B699 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9d-1A0A075B699 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9d-1A0A075B699 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9d-1A0A075B699 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9d-1A0A075B699 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9d-1A0A075B699 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms