Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav16A0A075B653 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
Trav16A0A075B653 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav16A0A075B653 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.05■□□□□ -0
Trav16A0A075B653 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.05■□□□□ -0
Trav16A0A075B653 Gm12366-201ENSMUST00000121722 873 ntBASIC15.05■□□□□ -0
Trav16A0A075B653 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.05■□□□□ -0
Trav16A0A075B653 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav16A0A075B653 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.05■□□□□ -0
Trav16A0A075B653 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.05■□□□□ -0
Trav16A0A075B653 Gm5786-201ENSMUST00000085368 882 ntBASIC15.05■□□□□ -0
Trav16A0A075B653 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav16A0A075B653 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav16A0A075B653 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Trav16A0A075B653 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav16A0A075B653 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav16A0A075B653 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav16A0A075B653 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav16A0A075B653 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav16A0A075B653 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav16A0A075B653 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav16A0A075B653 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav16A0A075B653 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16A0A075B653 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16A0A075B653 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16A0A075B653 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav16A0A075B653 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16A0A075B653 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav16A0A075B653 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16A0A075B653 Gm11175-201ENSMUST00000116172 543 ntBASIC15.04■□□□□ -0
Trav16A0A075B653 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16A0A075B653 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16A0A075B653 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16A0A075B653 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16A0A075B653 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16A0A075B653 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16A0A075B653 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16A0A075B653 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16A0A075B653 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16A0A075B653 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16A0A075B653 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16A0A075B653 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16A0A075B653 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav16A0A075B653 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16A0A075B653 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav16A0A075B653 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16A0A075B653 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16A0A075B653 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16A0A075B653 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16A0A075B653 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16A0A075B653 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav16A0A075B653 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16A0A075B653 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16A0A075B653 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16A0A075B653 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16A0A075B653 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.02■□□□□ -0
Trav16A0A075B653 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Trav16A0A075B653 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trav16A0A075B653 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav16A0A075B653 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav16A0A075B653 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav16A0A075B653 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trav16A0A075B653 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav16A0A075B653 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav16A0A075B653 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Trav16A0A075B653 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16A0A075B653 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16A0A075B653 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.01□□□□□ -0.01
Trav16A0A075B653 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16A0A075B653 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16A0A075B653 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16A0A075B653 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16A0A075B653 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav16A0A075B653 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.01□□□□□ -0.01
Trav16A0A075B653 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16A0A075B653 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16A0A075B653 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16A0A075B653 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Trav16A0A075B653 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav16A0A075B653 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16A0A075B653 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav16A0A075B653 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
Trav16A0A075B653 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16A0A075B653 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15□□□□□ -0.01
Trav16A0A075B653 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16A0A075B653 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16A0A075B653 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16A0A075B653 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav16A0A075B653 Gm16464-201ENSMUST00000117815 1095 ntBASIC15□□□□□ -0.01
Trav16A0A075B653 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15□□□□□ -0.01
Trav16A0A075B653 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16A0A075B653 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16A0A075B653 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16A0A075B653 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16A0A075B653 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav16A0A075B653 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav16A0A075B653 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.99□□□□□ -0.01
Trav16A0A075B653 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16A0A075B653 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav16A0A075B653 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms