Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Speer3W4VSP1 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.88■□□□□ 0.77
Speer3W4VSP1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Speer3W4VSP1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Speer3W4VSP1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Speer3W4VSP1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Speer3W4VSP1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Speer3W4VSP1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Speer3W4VSP1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Speer3W4VSP1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Speer3W4VSP1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Speer3W4VSP1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Speer3W4VSP1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Speer3W4VSP1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Speer3W4VSP1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Speer3W4VSP1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Speer3W4VSP1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Speer3W4VSP1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.86■□□□□ 0.77
Speer3W4VSP1 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC19.86■□□□□ 0.77
Speer3W4VSP1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Speer3W4VSP1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.85■□□□□ 0.77
Speer3W4VSP1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Speer3W4VSP1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Speer3W4VSP1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.85■□□□□ 0.77
Speer3W4VSP1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Speer3W4VSP1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Speer3W4VSP1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Speer3W4VSP1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Speer3W4VSP1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Speer3W4VSP1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Speer3W4VSP1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Speer3W4VSP1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.84■□□□□ 0.77
Speer3W4VSP1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Speer3W4VSP1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.84■□□□□ 0.77
Speer3W4VSP1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Speer3W4VSP1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Speer3W4VSP1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Speer3W4VSP1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.84■□□□□ 0.77
Speer3W4VSP1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Speer3W4VSP1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Speer3W4VSP1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Speer3W4VSP1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Speer3W4VSP1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Speer3W4VSP1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Speer3W4VSP1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Speer3W4VSP1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Speer3W4VSP1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Speer3W4VSP1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Speer3W4VSP1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.83■□□□□ 0.76
Speer3W4VSP1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Speer3W4VSP1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Speer3W4VSP1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Speer3W4VSP1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Speer3W4VSP1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Speer3W4VSP1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Speer3W4VSP1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Speer3W4VSP1 Gm14117-201ENSMUST00000122417 843 ntBASIC19.82■□□□□ 0.76
Speer3W4VSP1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.82■□□□□ 0.76
Speer3W4VSP1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Speer3W4VSP1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Speer3W4VSP1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Speer3W4VSP1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Speer3W4VSP1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
Speer3W4VSP1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Speer3W4VSP1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Speer3W4VSP1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.81■□□□□ 0.76
Speer3W4VSP1 Gm45102-201ENSMUST00000207427 857 ntBASIC19.81■□□□□ 0.76
Speer3W4VSP1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Speer3W4VSP1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Speer3W4VSP1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.81■□□□□ 0.76
Speer3W4VSP1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Speer3W4VSP1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Speer3W4VSP1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Speer3W4VSP1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Speer3W4VSP1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Speer3W4VSP1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Speer3W4VSP1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
Speer3W4VSP1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Speer3W4VSP1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Speer3W4VSP1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Speer3W4VSP1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Speer3W4VSP1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Speer3W4VSP1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Speer3W4VSP1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Speer3W4VSP1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Speer3W4VSP1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Speer3W4VSP1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.79■□□□□ 0.76
Speer3W4VSP1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Speer3W4VSP1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Speer3W4VSP1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Speer3W4VSP1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.79■□□□□ 0.76
Speer3W4VSP1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.79■□□□□ 0.76
Speer3W4VSP1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Speer3W4VSP1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Speer3W4VSP1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Speer3W4VSP1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Speer3W4VSP1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Speer3W4VSP1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Speer3W4VSP1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Speer3W4VSP1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms