Protein–RNA interactions for Protein: Q9WV55

Vapa, Vesicle-associated membrane protein-associated protein A, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VapaQ9WV55 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VapaQ9WV55 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VapaQ9WV55 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VapaQ9WV55 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VapaQ9WV55 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.73■□□□□ 0.59
VapaQ9WV55 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VapaQ9WV55 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VapaQ9WV55 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VapaQ9WV55 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VapaQ9WV55 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
VapaQ9WV55 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
VapaQ9WV55 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VapaQ9WV55 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
VapaQ9WV55 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.72■□□□□ 0.59
VapaQ9WV55 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.72■□□□□ 0.59
VapaQ9WV55 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VapaQ9WV55 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VapaQ9WV55 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
VapaQ9WV55 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VapaQ9WV55 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VapaQ9WV55 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VapaQ9WV55 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VapaQ9WV55 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VapaQ9WV55 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.71■□□□□ 0.59
VapaQ9WV55 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.71■□□□□ 0.59
VapaQ9WV55 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VapaQ9WV55 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VapaQ9WV55 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VapaQ9WV55 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VapaQ9WV55 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VapaQ9WV55 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VapaQ9WV55 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VapaQ9WV55 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
VapaQ9WV55 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
VapaQ9WV55 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VapaQ9WV55 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VapaQ9WV55 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VapaQ9WV55 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VapaQ9WV55 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VapaQ9WV55 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VapaQ9WV55 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.7■□□□□ 0.58
VapaQ9WV55 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VapaQ9WV55 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VapaQ9WV55 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
VapaQ9WV55 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VapaQ9WV55 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VapaQ9WV55 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VapaQ9WV55 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VapaQ9WV55 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
VapaQ9WV55 Gm15546-201ENSMUST00000122095 826 ntBASIC18.69■□□□□ 0.58
VapaQ9WV55 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VapaQ9WV55 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VapaQ9WV55 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VapaQ9WV55 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.68■□□□□ 0.58
VapaQ9WV55 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
VapaQ9WV55 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VapaQ9WV55 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VapaQ9WV55 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.68■□□□□ 0.58
VapaQ9WV55 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VapaQ9WV55 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VapaQ9WV55 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VapaQ9WV55 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VapaQ9WV55 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VapaQ9WV55 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VapaQ9WV55 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
VapaQ9WV55 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VapaQ9WV55 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VapaQ9WV55 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
VapaQ9WV55 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VapaQ9WV55 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VapaQ9WV55 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VapaQ9WV55 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.67■□□□□ 0.58
VapaQ9WV55 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VapaQ9WV55 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VapaQ9WV55 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.66■□□□□ 0.58
VapaQ9WV55 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VapaQ9WV55 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VapaQ9WV55 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.66■□□□□ 0.58
VapaQ9WV55 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VapaQ9WV55 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
VapaQ9WV55 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VapaQ9WV55 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VapaQ9WV55 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
VapaQ9WV55 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.66■□□□□ 0.58
VapaQ9WV55 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VapaQ9WV55 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
VapaQ9WV55 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VapaQ9WV55 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VapaQ9WV55 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VapaQ9WV55 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VapaQ9WV55 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VapaQ9WV55 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
VapaQ9WV55 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VapaQ9WV55 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VapaQ9WV55 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.64■□□□□ 0.57
VapaQ9WV55 Gm22238-201ENSMUST00000175222 88 ntBASIC18.64■□□□□ 0.57
VapaQ9WV55 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
VapaQ9WV55 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.64■□□□□ 0.57
VapaQ9WV55 Gm9959-201ENSMUST00000068277 390 ntBASIC18.64■□□□□ 0.57
VapaQ9WV55 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms