Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpf2Q9JJ80 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.9■□□□□ 0.94
Rpf2Q9JJ80 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.89■□□□□ 0.94
Rpf2Q9JJ80 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpf2Q9JJ80 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.89■□□□□ 0.93
Rpf2Q9JJ80 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rpf2Q9JJ80 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpf2Q9JJ80 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.89■□□□□ 0.93
Rpf2Q9JJ80 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rpf2Q9JJ80 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpf2Q9JJ80 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rpf2Q9JJ80 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpf2Q9JJ80 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.88■□□□□ 0.93
Rpf2Q9JJ80 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpf2Q9JJ80 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Rpf2Q9JJ80 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpf2Q9JJ80 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpf2Q9JJ80 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpf2Q9JJ80 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpf2Q9JJ80 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpf2Q9JJ80 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rpf2Q9JJ80 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpf2Q9JJ80 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpf2Q9JJ80 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Rpf2Q9JJ80 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpf2Q9JJ80 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rpf2Q9JJ80 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rpf2Q9JJ80 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpf2Q9JJ80 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rpf2Q9JJ80 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.87■□□□□ 0.93
Rpf2Q9JJ80 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rpf2Q9JJ80 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpf2Q9JJ80 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rpf2Q9JJ80 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rpf2Q9JJ80 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpf2Q9JJ80 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpf2Q9JJ80 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpf2Q9JJ80 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpf2Q9JJ80 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rpf2Q9JJ80 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.86■□□□□ 0.93
Rpf2Q9JJ80 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.86■□□□□ 0.93
Rpf2Q9JJ80 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.86■□□□□ 0.93
Rpf2Q9JJ80 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.86■□□□□ 0.93
Rpf2Q9JJ80 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.86■□□□□ 0.93
Rpf2Q9JJ80 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Rpf2Q9JJ80 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Rpf2Q9JJ80 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpf2Q9JJ80 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpf2Q9JJ80 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Rpf2Q9JJ80 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Rpf2Q9JJ80 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpf2Q9JJ80 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.85■□□□□ 0.93
Rpf2Q9JJ80 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.85■□□□□ 0.93
Rpf2Q9JJ80 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.85■□□□□ 0.93
Rpf2Q9JJ80 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
Rpf2Q9JJ80 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.85■□□□□ 0.93
Rpf2Q9JJ80 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpf2Q9JJ80 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rpf2Q9JJ80 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rpf2Q9JJ80 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpf2Q9JJ80 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rpf2Q9JJ80 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.84■□□□□ 0.93
Rpf2Q9JJ80 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpf2Q9JJ80 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.84■□□□□ 0.93
Rpf2Q9JJ80 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rpf2Q9JJ80 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Rpf2Q9JJ80 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rpf2Q9JJ80 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Rpf2Q9JJ80 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpf2Q9JJ80 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpf2Q9JJ80 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpf2Q9JJ80 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Rpf2Q9JJ80 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpf2Q9JJ80 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
Rpf2Q9JJ80 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Rpf2Q9JJ80 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpf2Q9JJ80 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Rpf2Q9JJ80 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Rpf2Q9JJ80 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rpf2Q9JJ80 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rpf2Q9JJ80 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpf2Q9JJ80 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpf2Q9JJ80 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpf2Q9JJ80 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpf2Q9JJ80 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.82■□□□□ 0.92
Rpf2Q9JJ80 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.82■□□□□ 0.92
Rpf2Q9JJ80 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.82■□□□□ 0.92
Rpf2Q9JJ80 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpf2Q9JJ80 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpf2Q9JJ80 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Rpf2Q9JJ80 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpf2Q9JJ80 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpf2Q9JJ80 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.82■□□□□ 0.92
Rpf2Q9JJ80 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpf2Q9JJ80 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpf2Q9JJ80 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rpf2Q9JJ80 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpf2Q9JJ80 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpf2Q9JJ80 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpf2Q9JJ80 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms