Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hcfc2Q9D968 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hcfc2Q9D968 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hcfc2Q9D968 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hcfc2Q9D968 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hcfc2Q9D968 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Hcfc2Q9D968 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hcfc2Q9D968 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hcfc2Q9D968 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hcfc2Q9D968 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Hcfc2Q9D968 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hcfc2Q9D968 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hcfc2Q9D968 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hcfc2Q9D968 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hcfc2Q9D968 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Hcfc2Q9D968 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hcfc2Q9D968 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hcfc2Q9D968 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.88□□□□□ -0.03
Hcfc2Q9D968 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hcfc2Q9D968 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hcfc2Q9D968 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hcfc2Q9D968 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Hcfc2Q9D968 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hcfc2Q9D968 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hcfc2Q9D968 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hcfc2Q9D968 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.86□□□□□ -0.03
Hcfc2Q9D968 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hcfc2Q9D968 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hcfc2Q9D968 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hcfc2Q9D968 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hcfc2Q9D968 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hcfc2Q9D968 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hcfc2Q9D968 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hcfc2Q9D968 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hcfc2Q9D968 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hcfc2Q9D968 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hcfc2Q9D968 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hcfc2Q9D968 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
Hcfc2Q9D968 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hcfc2Q9D968 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Hcfc2Q9D968 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hcfc2Q9D968 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hcfc2Q9D968 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hcfc2Q9D968 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.85□□□□□ -0.03
Hcfc2Q9D968 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hcfc2Q9D968 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.85□□□□□ -0.03
Hcfc2Q9D968 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hcfc2Q9D968 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hcfc2Q9D968 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Hcfc2Q9D968 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hcfc2Q9D968 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hcfc2Q9D968 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hcfc2Q9D968 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hcfc2Q9D968 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hcfc2Q9D968 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.84□□□□□ -0.03
Hcfc2Q9D968 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hcfc2Q9D968 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Hcfc2Q9D968 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Hcfc2Q9D968 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Hcfc2Q9D968 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hcfc2Q9D968 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.84□□□□□ -0.03
Hcfc2Q9D968 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.84□□□□□ -0.03
Hcfc2Q9D968 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hcfc2Q9D968 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hcfc2Q9D968 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Hcfc2Q9D968 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hcfc2Q9D968 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hcfc2Q9D968 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.83□□□□□ -0.04
Hcfc2Q9D968 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.83□□□□□ -0.04
Hcfc2Q9D968 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.83□□□□□ -0.04
Hcfc2Q9D968 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hcfc2Q9D968 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hcfc2Q9D968 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hcfc2Q9D968 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.83□□□□□ -0.04
Hcfc2Q9D968 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Hcfc2Q9D968 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hcfc2Q9D968 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.82□□□□□ -0.04
Hcfc2Q9D968 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Hcfc2Q9D968 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms