Protein–RNA interactions for Protein: Q9CPU1

Ssxb1, MCG116417, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxb1Q9CPU1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssxb1Q9CPU1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ssxb1Q9CPU1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssxb1Q9CPU1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssxb1Q9CPU1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssxb1Q9CPU1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.22■□□□□ 0.67
Ssxb1Q9CPU1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ssxb1Q9CPU1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssxb1Q9CPU1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssxb1Q9CPU1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ssxb1Q9CPU1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssxb1Q9CPU1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssxb1Q9CPU1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.21■□□□□ 0.67
Ssxb1Q9CPU1 Gm9870-201ENSMUST00000063874 645 ntBASIC19.21■□□□□ 0.67
Ssxb1Q9CPU1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssxb1Q9CPU1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssxb1Q9CPU1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssxb1Q9CPU1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ssxb1Q9CPU1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ssxb1Q9CPU1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.2■□□□□ 0.66
Ssxb1Q9CPU1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssxb1Q9CPU1 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.2■□□□□ 0.66
Ssxb1Q9CPU1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssxb1Q9CPU1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssxb1Q9CPU1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssxb1Q9CPU1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssxb1Q9CPU1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.19■□□□□ 0.66
Ssxb1Q9CPU1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssxb1Q9CPU1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Ssxb1Q9CPU1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssxb1Q9CPU1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssxb1Q9CPU1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssxb1Q9CPU1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssxb1Q9CPU1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssxb1Q9CPU1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ssxb1Q9CPU1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssxb1Q9CPU1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssxb1Q9CPU1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssxb1Q9CPU1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssxb1Q9CPU1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssxb1Q9CPU1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ssxb1Q9CPU1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssxb1Q9CPU1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ssxb1Q9CPU1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.17■□□□□ 0.66
Ssxb1Q9CPU1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.17■□□□□ 0.66
Ssxb1Q9CPU1 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.17■□□□□ 0.66
Ssxb1Q9CPU1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.17■□□□□ 0.66
Ssxb1Q9CPU1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ssxb1Q9CPU1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Ssxb1Q9CPU1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
Ssxb1Q9CPU1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssxb1Q9CPU1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssxb1Q9CPU1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssxb1Q9CPU1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssxb1Q9CPU1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.16■□□□□ 0.66
Ssxb1Q9CPU1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.16■□□□□ 0.66
Ssxb1Q9CPU1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssxb1Q9CPU1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ssxb1Q9CPU1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssxb1Q9CPU1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ssxb1Q9CPU1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssxb1Q9CPU1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ssxb1Q9CPU1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssxb1Q9CPU1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssxb1Q9CPU1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ssxb1Q9CPU1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.15■□□□□ 0.66
Ssxb1Q9CPU1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssxb1Q9CPU1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssxb1Q9CPU1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ssxb1Q9CPU1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ssxb1Q9CPU1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ssxb1Q9CPU1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ssxb1Q9CPU1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ssxb1Q9CPU1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssxb1Q9CPU1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssxb1Q9CPU1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ssxb1Q9CPU1 Golph3-205ENSMUST00000228671 2842 ntBASIC19.14■□□□□ 0.65
Ssxb1Q9CPU1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssxb1Q9CPU1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.14■□□□□ 0.65
Ssxb1Q9CPU1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.14■□□□□ 0.65
Ssxb1Q9CPU1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssxb1Q9CPU1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssxb1Q9CPU1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssxb1Q9CPU1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssxb1Q9CPU1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ssxb1Q9CPU1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssxb1Q9CPU1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.14■□□□□ 0.65
Ssxb1Q9CPU1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssxb1Q9CPU1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssxb1Q9CPU1 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.13■□□□□ 0.65
Ssxb1Q9CPU1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssxb1Q9CPU1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssxb1Q9CPU1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssxb1Q9CPU1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssxb1Q9CPU1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ssxb1Q9CPU1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssxb1Q9CPU1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ssxb1Q9CPU1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssxb1Q9CPU1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssxb1Q9CPU1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms