Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim8Q99PJ2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim8Q99PJ2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim8Q99PJ2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim8Q99PJ2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim8Q99PJ2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim8Q99PJ2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim8Q99PJ2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim8Q99PJ2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim8Q99PJ2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trim8Q99PJ2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim8Q99PJ2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim8Q99PJ2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim8Q99PJ2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim8Q99PJ2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.17■□□□□ 0.66
Trim8Q99PJ2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trim8Q99PJ2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim8Q99PJ2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim8Q99PJ2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim8Q99PJ2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim8Q99PJ2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim8Q99PJ2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim8Q99PJ2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim8Q99PJ2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim8Q99PJ2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim8Q99PJ2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim8Q99PJ2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim8Q99PJ2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim8Q99PJ2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim8Q99PJ2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim8Q99PJ2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trim8Q99PJ2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim8Q99PJ2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim8Q99PJ2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim8Q99PJ2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.15■□□□□ 0.66
Trim8Q99PJ2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trim8Q99PJ2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim8Q99PJ2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trim8Q99PJ2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim8Q99PJ2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trim8Q99PJ2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim8Q99PJ2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim8Q99PJ2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim8Q99PJ2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim8Q99PJ2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim8Q99PJ2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim8Q99PJ2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim8Q99PJ2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim8Q99PJ2 Gm40881-201ENSMUST00000223397 166 ntBASIC19.14■□□□□ 0.65
Trim8Q99PJ2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trim8Q99PJ2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim8Q99PJ2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim8Q99PJ2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim8Q99PJ2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim8Q99PJ2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim8Q99PJ2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim8Q99PJ2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim8Q99PJ2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim8Q99PJ2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.13■□□□□ 0.65
Trim8Q99PJ2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim8Q99PJ2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim8Q99PJ2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trim8Q99PJ2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim8Q99PJ2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim8Q99PJ2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim8Q99PJ2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim8Q99PJ2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim8Q99PJ2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim8Q99PJ2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim8Q99PJ2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim8Q99PJ2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim8Q99PJ2 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.12■□□□□ 0.65
Trim8Q99PJ2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim8Q99PJ2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim8Q99PJ2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.12■□□□□ 0.65
Trim8Q99PJ2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim8Q99PJ2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim8Q99PJ2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim8Q99PJ2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.11■□□□□ 0.65
Trim8Q99PJ2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim8Q99PJ2 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.11■□□□□ 0.65
Trim8Q99PJ2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.11■□□□□ 0.65
Trim8Q99PJ2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim8Q99PJ2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Trim8Q99PJ2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim8Q99PJ2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim8Q99PJ2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Trim8Q99PJ2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim8Q99PJ2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trim8Q99PJ2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Trim8Q99PJ2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim8Q99PJ2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim8Q99PJ2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim8Q99PJ2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.1■□□□□ 0.65
Trim8Q99PJ2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Trim8Q99PJ2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim8Q99PJ2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim8Q99PJ2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim8Q99PJ2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim8Q99PJ2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms