Protein–RNA interactions for Protein: Q91Y13

Pcdha7, Protocadherin alpha-7, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha7Q91Y13 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha7Q91Y13 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha7Q91Y13 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Pcdha7Q91Y13 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha7Q91Y13 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.52■■□□□ 1.04
Pcdha7Q91Y13 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
Pcdha7Q91Y13 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdha7Q91Y13 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdha7Q91Y13 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha7Q91Y13 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha7Q91Y13 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha7Q91Y13 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.51■■□□□ 1.03
Pcdha7Q91Y13 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha7Q91Y13 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.51■■□□□ 1.03
Pcdha7Q91Y13 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha7Q91Y13 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha7Q91Y13 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdha7Q91Y13 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha7Q91Y13 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha7Q91Y13 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha7Q91Y13 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdha7Q91Y13 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdha7Q91Y13 Etf1-202ENSMUST00000180351 108 ntBASIC21.5■■□□□ 1.03
Pcdha7Q91Y13 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha7Q91Y13 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha7Q91Y13 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha7Q91Y13 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha7Q91Y13 Gm7417-201ENSMUST00000192950 473 ntBASIC21.49■■□□□ 1.03
Pcdha7Q91Y13 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha7Q91Y13 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdha7Q91Y13 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha7Q91Y13 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha7Q91Y13 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha7Q91Y13 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha7Q91Y13 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha7Q91Y13 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha7Q91Y13 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.48■■□□□ 1.03
Pcdha7Q91Y13 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Pcdha7Q91Y13 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Pcdha7Q91Y13 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.48■■□□□ 1.03
Pcdha7Q91Y13 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Pcdha7Q91Y13 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcdha7Q91Y13 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha7Q91Y13 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdha7Q91Y13 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.47■■□□□ 1.03
Pcdha7Q91Y13 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha7Q91Y13 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha7Q91Y13 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha7Q91Y13 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha7Q91Y13 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha7Q91Y13 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
Pcdha7Q91Y13 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha7Q91Y13 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha7Q91Y13 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha7Q91Y13 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha7Q91Y13 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha7Q91Y13 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha7Q91Y13 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha7Q91Y13 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha7Q91Y13 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha7Q91Y13 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.46■■□□□ 1.03
Pcdha7Q91Y13 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha7Q91Y13 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha7Q91Y13 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha7Q91Y13 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha7Q91Y13 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Pcdha7Q91Y13 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Pcdha7Q91Y13 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Pcdha7Q91Y13 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Pcdha7Q91Y13 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha7Q91Y13 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha7Q91Y13 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha7Q91Y13 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha7Q91Y13 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Pcdha7Q91Y13 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha7Q91Y13 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha7Q91Y13 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha7Q91Y13 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha7Q91Y13 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.44■■□□□ 1.02
Pcdha7Q91Y13 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha7Q91Y13 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.44■■□□□ 1.02
Pcdha7Q91Y13 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha7Q91Y13 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha7Q91Y13 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha7Q91Y13 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha7Q91Y13 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha7Q91Y13 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha7Q91Y13 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha7Q91Y13 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha7Q91Y13 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha7Q91Y13 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha7Q91Y13 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha7Q91Y13 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha7Q91Y13 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha7Q91Y13 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha7Q91Y13 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha7Q91Y13 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha7Q91Y13 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha7Q91Y13 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha7Q91Y13 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms