Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rab40cQ8VHQ4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.01■□□□□ 0.15
Rab40cQ8VHQ4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rab40cQ8VHQ4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rab40cQ8VHQ4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Rab40cQ8VHQ4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rab40cQ8VHQ4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rab40cQ8VHQ4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rab40cQ8VHQ4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16■□□□□ 0.15
Rab40cQ8VHQ4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rab40cQ8VHQ4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Rab40cQ8VHQ4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rab40cQ8VHQ4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rab40cQ8VHQ4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rab40cQ8VHQ4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rab40cQ8VHQ4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rab40cQ8VHQ4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rab40cQ8VHQ4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Rab40cQ8VHQ4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rab40cQ8VHQ4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rab40cQ8VHQ4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rab40cQ8VHQ4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Rab40cQ8VHQ4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rab40cQ8VHQ4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rab40cQ8VHQ4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rab40cQ8VHQ4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rab40cQ8VHQ4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rab40cQ8VHQ4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Rab40cQ8VHQ4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rab40cQ8VHQ4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Rab40cQ8VHQ4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rab40cQ8VHQ4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Rab40cQ8VHQ4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rab40cQ8VHQ4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rab40cQ8VHQ4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Rab40cQ8VHQ4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rab40cQ8VHQ4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rab40cQ8VHQ4 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.98■□□□□ 0.15
Rab40cQ8VHQ4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rab40cQ8VHQ4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rab40cQ8VHQ4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Rab40cQ8VHQ4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rab40cQ8VHQ4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rab40cQ8VHQ4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Rab40cQ8VHQ4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rab40cQ8VHQ4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rab40cQ8VHQ4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rab40cQ8VHQ4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Rab40cQ8VHQ4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.97■□□□□ 0.15
Rab40cQ8VHQ4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rab40cQ8VHQ4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rab40cQ8VHQ4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rab40cQ8VHQ4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rab40cQ8VHQ4 Golph3-205ENSMUST00000228671 2842 ntBASIC15.97■□□□□ 0.15
Rab40cQ8VHQ4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
Rab40cQ8VHQ4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Rab40cQ8VHQ4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Rab40cQ8VHQ4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rab40cQ8VHQ4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rab40cQ8VHQ4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rab40cQ8VHQ4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Rab40cQ8VHQ4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rab40cQ8VHQ4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rab40cQ8VHQ4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rab40cQ8VHQ4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Rab40cQ8VHQ4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Rab40cQ8VHQ4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rab40cQ8VHQ4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.96■□□□□ 0.15
Rab40cQ8VHQ4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rab40cQ8VHQ4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Rab40cQ8VHQ4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rab40cQ8VHQ4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rab40cQ8VHQ4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rab40cQ8VHQ4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Rab40cQ8VHQ4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Rab40cQ8VHQ4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rab40cQ8VHQ4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rab40cQ8VHQ4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Rab40cQ8VHQ4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Rab40cQ8VHQ4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rab40cQ8VHQ4 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.95■□□□□ 0.14
Rab40cQ8VHQ4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rab40cQ8VHQ4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Rab40cQ8VHQ4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rab40cQ8VHQ4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rab40cQ8VHQ4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rab40cQ8VHQ4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rab40cQ8VHQ4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rab40cQ8VHQ4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rab40cQ8VHQ4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rab40cQ8VHQ4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rab40cQ8VHQ4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rab40cQ8VHQ4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.94■□□□□ 0.14
Rab40cQ8VHQ4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.94■□□□□ 0.14
Rab40cQ8VHQ4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rab40cQ8VHQ4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rab40cQ8VHQ4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rab40cQ8VHQ4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40cQ8VHQ4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40cQ8VHQ4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms