Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpa1Q8VEE4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpa1Q8VEE4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Rpa1Q8VEE4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Rpa1Q8VEE4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpa1Q8VEE4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Rpa1Q8VEE4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Rpa1Q8VEE4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpa1Q8VEE4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rpa1Q8VEE4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpa1Q8VEE4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.68■□□□□ 0.74
Rpa1Q8VEE4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rpa1Q8VEE4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpa1Q8VEE4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rpa1Q8VEE4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa1Q8VEE4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa1Q8VEE4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa1Q8VEE4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa1Q8VEE4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Rpa1Q8VEE4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rpa1Q8VEE4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa1Q8VEE4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rpa1Q8VEE4 Rarb-207ENSMUST00000225921 2756 ntBASIC19.67■□□□□ 0.74
Rpa1Q8VEE4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa1Q8VEE4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa1Q8VEE4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa1Q8VEE4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa1Q8VEE4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa1Q8VEE4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa1Q8VEE4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpa1Q8VEE4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpa1Q8VEE4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rpa1Q8VEE4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpa1Q8VEE4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpa1Q8VEE4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rpa1Q8VEE4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpa1Q8VEE4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpa1Q8VEE4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rpa1Q8VEE4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpa1Q8VEE4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rpa1Q8VEE4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpa1Q8VEE4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpa1Q8VEE4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rpa1Q8VEE4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Rpa1Q8VEE4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpa1Q8VEE4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpa1Q8VEE4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpa1Q8VEE4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpa1Q8VEE4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpa1Q8VEE4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpa1Q8VEE4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpa1Q8VEE4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.65■□□□□ 0.74
Rpa1Q8VEE4 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.65■□□□□ 0.74
Rpa1Q8VEE4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rpa1Q8VEE4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rpa1Q8VEE4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rpa1Q8VEE4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpa1Q8VEE4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpa1Q8VEE4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpa1Q8VEE4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpa1Q8VEE4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rpa1Q8VEE4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rpa1Q8VEE4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rpa1Q8VEE4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rpa1Q8VEE4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpa1Q8VEE4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rpa1Q8VEE4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpa1Q8VEE4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpa1Q8VEE4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rpa1Q8VEE4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rpa1Q8VEE4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpa1Q8VEE4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpa1Q8VEE4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpa1Q8VEE4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpa1Q8VEE4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rpa1Q8VEE4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpa1Q8VEE4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Rpa1Q8VEE4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rpa1Q8VEE4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rpa1Q8VEE4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpa1Q8VEE4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms