Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim6Q8BGE7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Trim6Q8BGE7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Trim6Q8BGE7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.76■□□□□ 0.91
Trim6Q8BGE7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Trim6Q8BGE7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim6Q8BGE7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trim6Q8BGE7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim6Q8BGE7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim6Q8BGE7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim6Q8BGE7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim6Q8BGE7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim6Q8BGE7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim6Q8BGE7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim6Q8BGE7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Trim6Q8BGE7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim6Q8BGE7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim6Q8BGE7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim6Q8BGE7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim6Q8BGE7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim6Q8BGE7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim6Q8BGE7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim6Q8BGE7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim6Q8BGE7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim6Q8BGE7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim6Q8BGE7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim6Q8BGE7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim6Q8BGE7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim6Q8BGE7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim6Q8BGE7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim6Q8BGE7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim6Q8BGE7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim6Q8BGE7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim6Q8BGE7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim6Q8BGE7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim6Q8BGE7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim6Q8BGE7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim6Q8BGE7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim6Q8BGE7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Trim6Q8BGE7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim6Q8BGE7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim6Q8BGE7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Trim6Q8BGE7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim6Q8BGE7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim6Q8BGE7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim6Q8BGE7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim6Q8BGE7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim6Q8BGE7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim6Q8BGE7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim6Q8BGE7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Trim6Q8BGE7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim6Q8BGE7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.72■□□□□ 0.91
Trim6Q8BGE7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim6Q8BGE7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim6Q8BGE7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim6Q8BGE7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim6Q8BGE7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim6Q8BGE7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Trim6Q8BGE7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim6Q8BGE7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.71■□□□□ 0.91
Trim6Q8BGE7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim6Q8BGE7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim6Q8BGE7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim6Q8BGE7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim6Q8BGE7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim6Q8BGE7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim6Q8BGE7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Trim6Q8BGE7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.7■□□□□ 0.9
Trim6Q8BGE7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim6Q8BGE7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim6Q8BGE7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim6Q8BGE7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim6Q8BGE7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.7■□□□□ 0.9
Trim6Q8BGE7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim6Q8BGE7 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.7■□□□□ 0.9
Trim6Q8BGE7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim6Q8BGE7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim6Q8BGE7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim6Q8BGE7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trim6Q8BGE7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim6Q8BGE7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.7■□□□□ 0.9
Trim6Q8BGE7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim6Q8BGE7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim6Q8BGE7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim6Q8BGE7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.69■□□□□ 0.9
Trim6Q8BGE7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim6Q8BGE7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim6Q8BGE7 Gm40881-201ENSMUST00000223397 166 ntBASIC20.69■□□□□ 0.9
Trim6Q8BGE7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trim6Q8BGE7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Trim6Q8BGE7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim6Q8BGE7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim6Q8BGE7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim6Q8BGE7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim6Q8BGE7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim6Q8BGE7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim6Q8BGE7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
Trim6Q8BGE7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim6Q8BGE7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim6Q8BGE7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms