Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.8■□□□□ 0.6
Rfx4Q7TNK1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.8■□□□□ 0.6
Rfx4Q7TNK1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rfx4Q7TNK1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rfx4Q7TNK1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx4Q7TNK1 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.79■□□□□ 0.6
Rfx4Q7TNK1 Mir6538-201ENSMUST00000183713 110 ntBASIC18.79■□□□□ 0.6
Rfx4Q7TNK1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.79■□□□□ 0.6
Rfx4Q7TNK1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.79■□□□□ 0.6
Rfx4Q7TNK1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx4Q7TNK1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx4Q7TNK1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx4Q7TNK1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx4Q7TNK1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx4Q7TNK1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.79■□□□□ 0.6
Rfx4Q7TNK1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx4Q7TNK1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx4Q7TNK1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx4Q7TNK1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx4Q7TNK1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx4Q7TNK1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx4Q7TNK1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx4Q7TNK1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rfx4Q7TNK1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx4Q7TNK1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx4Q7TNK1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Rfx4Q7TNK1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx4Q7TNK1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx4Q7TNK1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rfx4Q7TNK1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx4Q7TNK1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx4Q7TNK1 Mir6236-201ENSMUST00000184437 123 ntBASIC18.77■□□□□ 0.6
Rfx4Q7TNK1 Gm7143-201ENSMUST00000222811 859 ntBASIC18.77■□□□□ 0.6
Rfx4Q7TNK1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx4Q7TNK1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rfx4Q7TNK1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx4Q7TNK1 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.77■□□□□ 0.6
Rfx4Q7TNK1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx4Q7TNK1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Rfx4Q7TNK1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx4Q7TNK1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx4Q7TNK1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx4Q7TNK1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx4Q7TNK1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx4Q7TNK1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Rfx4Q7TNK1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.76■□□□□ 0.59
Rfx4Q7TNK1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx4Q7TNK1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx4Q7TNK1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx4Q7TNK1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx4Q7TNK1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx4Q7TNK1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx4Q7TNK1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rfx4Q7TNK1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx4Q7TNK1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx4Q7TNK1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rfx4Q7TNK1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx4Q7TNK1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rfx4Q7TNK1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.75■□□□□ 0.59
Rfx4Q7TNK1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx4Q7TNK1 Gm10399-202ENSMUST00000202768 748 ntBASIC18.75■□□□□ 0.59
Rfx4Q7TNK1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx4Q7TNK1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx4Q7TNK1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx4Q7TNK1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rfx4Q7TNK1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx4Q7TNK1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx4Q7TNK1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.75■□□□□ 0.59
Rfx4Q7TNK1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.75■□□□□ 0.59
Rfx4Q7TNK1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx4Q7TNK1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.74■□□□□ 0.59
Rfx4Q7TNK1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx4Q7TNK1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.74■□□□□ 0.59
Rfx4Q7TNK1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx4Q7TNK1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.74■□□□□ 0.59
Rfx4Q7TNK1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Rfx4Q7TNK1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx4Q7TNK1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.74■□□□□ 0.59
Rfx4Q7TNK1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Rfx4Q7TNK1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rfx4Q7TNK1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx4Q7TNK1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx4Q7TNK1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx4Q7TNK1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx4Q7TNK1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx4Q7TNK1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx4Q7TNK1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.72■□□□□ 0.59
Rfx4Q7TNK1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx4Q7TNK1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx4Q7TNK1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx4Q7TNK1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.72■□□□□ 0.59
Rfx4Q7TNK1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx4Q7TNK1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.72■□□□□ 0.59
Rfx4Q7TNK1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rfx4Q7TNK1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx4Q7TNK1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx4Q7TNK1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx4Q7TNK1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx4Q7TNK1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx4Q7TNK1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms