Protein–RNA interactions for Protein: Q63739

Ptp4a1, Protein tyrosine phosphatase type IVA 1, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptp4a1Q63739 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ptp4a1Q63739 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ptp4a1Q63739 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Ptp4a1Q63739 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ptp4a1Q63739 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.63■□□□□ 0.41
Ptp4a1Q63739 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ptp4a1Q63739 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.63■□□□□ 0.41
Ptp4a1Q63739 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ptp4a1Q63739 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptp4a1Q63739 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptp4a1Q63739 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptp4a1Q63739 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptp4a1Q63739 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ptp4a1Q63739 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ptp4a1Q63739 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ptp4a1Q63739 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ptp4a1Q63739 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.62■□□□□ 0.41
Ptp4a1Q63739 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.62■□□□□ 0.41
Ptp4a1Q63739 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Ptp4a1Q63739 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ptp4a1Q63739 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptp4a1Q63739 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ptp4a1Q63739 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptp4a1Q63739 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ptp4a1Q63739 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ptp4a1Q63739 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ptp4a1Q63739 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ptp4a1Q63739 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ptp4a1Q63739 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ptp4a1Q63739 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ptp4a1Q63739 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.61■□□□□ 0.41
Ptp4a1Q63739 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ptp4a1Q63739 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.61■□□□□ 0.41
Ptp4a1Q63739 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ptp4a1Q63739 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ptp4a1Q63739 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ptp4a1Q63739 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ptp4a1Q63739 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ptp4a1Q63739 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ptp4a1Q63739 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ptp4a1Q63739 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptp4a1Q63739 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptp4a1Q63739 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptp4a1Q63739 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptp4a1Q63739 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptp4a1Q63739 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ptp4a1Q63739 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptp4a1Q63739 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptp4a1Q63739 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ptp4a1Q63739 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptp4a1Q63739 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptp4a1Q63739 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptp4a1Q63739 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptp4a1Q63739 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
Ptp4a1Q63739 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptp4a1Q63739 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.59■□□□□ 0.41
Ptp4a1Q63739 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ptp4a1Q63739 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptp4a1Q63739 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ptp4a1Q63739 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.59■□□□□ 0.41
Ptp4a1Q63739 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptp4a1Q63739 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ptp4a1Q63739 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ptp4a1Q63739 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ptp4a1Q63739 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ptp4a1Q63739 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Ptp4a1Q63739 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.58■□□□□ 0.4
Ptp4a1Q63739 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.58■□□□□ 0.4
Ptp4a1Q63739 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ptp4a1Q63739 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ptp4a1Q63739 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ptp4a1Q63739 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ptp4a1Q63739 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ptp4a1Q63739 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ptp4a1Q63739 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptp4a1Q63739 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptp4a1Q63739 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptp4a1Q63739 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.57■□□□□ 0.4
Ptp4a1Q63739 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptp4a1Q63739 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptp4a1Q63739 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ptp4a1Q63739 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ptp4a1Q63739 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptp4a1Q63739 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.56■□□□□ 0.4
Ptp4a1Q63739 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ptp4a1Q63739 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.56■□□□□ 0.4
Ptp4a1Q63739 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ptp4a1Q63739 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.56■□□□□ 0.4
Ptp4a1Q63739 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ptp4a1Q63739 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ptp4a1Q63739 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ptp4a1Q63739 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ptp4a1Q63739 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ptp4a1Q63739 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ptp4a1Q63739 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ptp4a1Q63739 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ptp4a1Q63739 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
Ptp4a1Q63739 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.55■□□□□ 0.4
Ptp4a1Q63739 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ptp4a1Q63739 Gm22238-201ENSMUST00000175222 88 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms