Protein–RNA interactions for Protein: Q3UPL0

Sec31a, Protein transport protein Sec31A, mousemouse

Known RBP Predictions only

Length 1,230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec31aQ3UPL0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sec31aQ3UPL0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sec31aQ3UPL0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Sec31aQ3UPL0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Sec31aQ3UPL0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sec31aQ3UPL0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sec31aQ3UPL0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Sec31aQ3UPL0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sec31aQ3UPL0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.05■□□□□ 0.96
Sec31aQ3UPL0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sec31aQ3UPL0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sec31aQ3UPL0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sec31aQ3UPL0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sec31aQ3UPL0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sec31aQ3UPL0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sec31aQ3UPL0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sec31aQ3UPL0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.04■□□□□ 0.96
Sec31aQ3UPL0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.04■□□□□ 0.96
Sec31aQ3UPL0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sec31aQ3UPL0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sec31aQ3UPL0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.04■□□□□ 0.96
Sec31aQ3UPL0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sec31aQ3UPL0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sec31aQ3UPL0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sec31aQ3UPL0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sec31aQ3UPL0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sec31aQ3UPL0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sec31aQ3UPL0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sec31aQ3UPL0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sec31aQ3UPL0 Etf1-202ENSMUST00000180351 108 ntBASIC21.03■□□□□ 0.96
Sec31aQ3UPL0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.03■□□□□ 0.96
Sec31aQ3UPL0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Sec31aQ3UPL0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sec31aQ3UPL0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sec31aQ3UPL0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sec31aQ3UPL0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sec31aQ3UPL0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sec31aQ3UPL0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.02■□□□□ 0.96
Sec31aQ3UPL0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Sec31aQ3UPL0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sec31aQ3UPL0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sec31aQ3UPL0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sec31aQ3UPL0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sec31aQ3UPL0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sec31aQ3UPL0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sec31aQ3UPL0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sec31aQ3UPL0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sec31aQ3UPL0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sec31aQ3UPL0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sec31aQ3UPL0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sec31aQ3UPL0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sec31aQ3UPL0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Sec31aQ3UPL0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21■□□□□ 0.95
Sec31aQ3UPL0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sec31aQ3UPL0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sec31aQ3UPL0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sec31aQ3UPL0 Golph3-205ENSMUST00000228671 2842 ntBASIC21■□□□□ 0.95
Sec31aQ3UPL0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Sec31aQ3UPL0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Sec31aQ3UPL0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sec31aQ3UPL0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Sec31aQ3UPL0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sec31aQ3UPL0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sec31aQ3UPL0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sec31aQ3UPL0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sec31aQ3UPL0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.99■□□□□ 0.95
Sec31aQ3UPL0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
Sec31aQ3UPL0 Gm15546-201ENSMUST00000122095 826 ntBASIC20.99■□□□□ 0.95
Sec31aQ3UPL0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sec31aQ3UPL0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sec31aQ3UPL0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sec31aQ3UPL0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sec31aQ3UPL0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Sec31aQ3UPL0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sec31aQ3UPL0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sec31aQ3UPL0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.98■□□□□ 0.95
Sec31aQ3UPL0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sec31aQ3UPL0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sec31aQ3UPL0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sec31aQ3UPL0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Sec31aQ3UPL0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sec31aQ3UPL0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.98■□□□□ 0.95
Sec31aQ3UPL0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Sec31aQ3UPL0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.98■□□□□ 0.95
Sec31aQ3UPL0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sec31aQ3UPL0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Sec31aQ3UPL0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sec31aQ3UPL0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sec31aQ3UPL0 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.97■□□□□ 0.95
Sec31aQ3UPL0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sec31aQ3UPL0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sec31aQ3UPL0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.97■□□□□ 0.95
Sec31aQ3UPL0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.97■□□□□ 0.95
Sec31aQ3UPL0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.97■□□□□ 0.95
Sec31aQ3UPL0 Gm9959-201ENSMUST00000068277 390 ntBASIC20.97■□□□□ 0.95
Sec31aQ3UPL0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sec31aQ3UPL0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.97■□□□□ 0.95
Sec31aQ3UPL0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sec31aQ3UPL0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sec31aQ3UPL0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms