Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.9■□□□□ 0.94
Nhej1Q3KNJ2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nhej1Q3KNJ2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nhej1Q3KNJ2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Nhej1Q3KNJ2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nhej1Q3KNJ2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Nhej1Q3KNJ2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.9■□□□□ 0.94
Nhej1Q3KNJ2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nhej1Q3KNJ2 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.9■□□□□ 0.94
Nhej1Q3KNJ2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nhej1Q3KNJ2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nhej1Q3KNJ2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nhej1Q3KNJ2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Nhej1Q3KNJ2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.9■□□□□ 0.94
Nhej1Q3KNJ2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nhej1Q3KNJ2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nhej1Q3KNJ2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nhej1Q3KNJ2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Nhej1Q3KNJ2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nhej1Q3KNJ2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nhej1Q3KNJ2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Nhej1Q3KNJ2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nhej1Q3KNJ2 Etf1-202ENSMUST00000180351 108 ntBASIC20.89■□□□□ 0.93
Nhej1Q3KNJ2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Nhej1Q3KNJ2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nhej1Q3KNJ2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nhej1Q3KNJ2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nhej1Q3KNJ2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nhej1Q3KNJ2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nhej1Q3KNJ2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Nhej1Q3KNJ2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.88■□□□□ 0.93
Nhej1Q3KNJ2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.88■□□□□ 0.93
Nhej1Q3KNJ2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.88■□□□□ 0.93
Nhej1Q3KNJ2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nhej1Q3KNJ2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nhej1Q3KNJ2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nhej1Q3KNJ2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
Nhej1Q3KNJ2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nhej1Q3KNJ2 Gm7417-201ENSMUST00000192950 473 ntBASIC20.87■□□□□ 0.93
Nhej1Q3KNJ2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nhej1Q3KNJ2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Nhej1Q3KNJ2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nhej1Q3KNJ2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nhej1Q3KNJ2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nhej1Q3KNJ2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nhej1Q3KNJ2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Nhej1Q3KNJ2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Nhej1Q3KNJ2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nhej1Q3KNJ2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nhej1Q3KNJ2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Nhej1Q3KNJ2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nhej1Q3KNJ2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Nhej1Q3KNJ2 Gm15820-201ENSMUST00000201566 728 ntBASIC20.86■□□□□ 0.93
Nhej1Q3KNJ2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.86■□□□□ 0.93
Nhej1Q3KNJ2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nhej1Q3KNJ2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nhej1Q3KNJ2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nhej1Q3KNJ2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nhej1Q3KNJ2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nhej1Q3KNJ2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nhej1Q3KNJ2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nhej1Q3KNJ2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Nhej1Q3KNJ2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Nhej1Q3KNJ2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nhej1Q3KNJ2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.85■□□□□ 0.93
Nhej1Q3KNJ2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Nhej1Q3KNJ2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nhej1Q3KNJ2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nhej1Q3KNJ2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Nhej1Q3KNJ2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nhej1Q3KNJ2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nhej1Q3KNJ2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
Nhej1Q3KNJ2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nhej1Q3KNJ2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nhej1Q3KNJ2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nhej1Q3KNJ2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nhej1Q3KNJ2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nhej1Q3KNJ2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Nhej1Q3KNJ2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nhej1Q3KNJ2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nhej1Q3KNJ2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nhej1Q3KNJ2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Nhej1Q3KNJ2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nhej1Q3KNJ2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nhej1Q3KNJ2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nhej1Q3KNJ2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nhej1Q3KNJ2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nhej1Q3KNJ2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nhej1Q3KNJ2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nhej1Q3KNJ2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nhej1Q3KNJ2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nhej1Q3KNJ2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nhej1Q3KNJ2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nhej1Q3KNJ2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nhej1Q3KNJ2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Nhej1Q3KNJ2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nhej1Q3KNJ2 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.81■□□□□ 0.92
Nhej1Q3KNJ2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nhej1Q3KNJ2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nhej1Q3KNJ2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms