Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SHROOM1Q2M3G4 AC090192.1-201ENST00000517740 490 ntBASIC25.99■■□□□ 1.75
SHROOM1Q2M3G4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SHROOM1Q2M3G4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.99■■□□□ 1.75
SHROOM1Q2M3G4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
SHROOM1Q2M3G4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SHROOM1Q2M3G4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.98■■□□□ 1.75
SHROOM1Q2M3G4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SHROOM1Q2M3G4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.98■■□□□ 1.75
SHROOM1Q2M3G4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.98■■□□□ 1.75
SHROOM1Q2M3G4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.98■■□□□ 1.75
SHROOM1Q2M3G4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.98■■□□□ 1.75
SHROOM1Q2M3G4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.98■■□□□ 1.75
SHROOM1Q2M3G4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SHROOM1Q2M3G4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.98■■□□□ 1.75
SHROOM1Q2M3G4 RARRES2P11-201ENST00000635158 484 ntBASIC25.98■■□□□ 1.75
SHROOM1Q2M3G4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.98■■□□□ 1.75
SHROOM1Q2M3G4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
SHROOM1Q2M3G4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SHROOM1Q2M3G4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.98■■□□□ 1.75
SHROOM1Q2M3G4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.98■■□□□ 1.75
SHROOM1Q2M3G4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SHROOM1Q2M3G4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SHROOM1Q2M3G4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
SHROOM1Q2M3G4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SHROOM1Q2M3G4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC25.97■■□□□ 1.75
SHROOM1Q2M3G4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
SHROOM1Q2M3G4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
SHROOM1Q2M3G4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
SHROOM1Q2M3G4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
SHROOM1Q2M3G4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
SHROOM1Q2M3G4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
SHROOM1Q2M3G4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.96■■□□□ 1.75
SHROOM1Q2M3G4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SHROOM1Q2M3G4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC25.96■■□□□ 1.75
SHROOM1Q2M3G4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.96■■□□□ 1.75
SHROOM1Q2M3G4 AL137784.2-201ENST00000607332 1000 ntBASIC25.96■■□□□ 1.75
SHROOM1Q2M3G4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
SHROOM1Q2M3G4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
SHROOM1Q2M3G4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SHROOM1Q2M3G4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC25.96■■□□□ 1.75
SHROOM1Q2M3G4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
SHROOM1Q2M3G4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.95■■□□□ 1.75
SHROOM1Q2M3G4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
SHROOM1Q2M3G4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC25.95■■□□□ 1.74
SHROOM1Q2M3G4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.95■■□□□ 1.74
SHROOM1Q2M3G4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SHROOM1Q2M3G4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC25.95■■□□□ 1.74
SHROOM1Q2M3G4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.95■■□□□ 1.74
SHROOM1Q2M3G4 NTF6G-201ENST00000591094 616 ntBASIC25.95■■□□□ 1.74
SHROOM1Q2M3G4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
SHROOM1Q2M3G4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
SHROOM1Q2M3G4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SHROOM1Q2M3G4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SHROOM1Q2M3G4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
SHROOM1Q2M3G4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.94■■□□□ 1.74
SHROOM1Q2M3G4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SHROOM1Q2M3G4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SHROOM1Q2M3G4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SHROOM1Q2M3G4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SHROOM1Q2M3G4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
SHROOM1Q2M3G4 AC004911.1-201ENST00000416316 871 ntBASIC25.94■■□□□ 1.74
SHROOM1Q2M3G4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SHROOM1Q2M3G4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.94■■□□□ 1.74
SHROOM1Q2M3G4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.94■■□□□ 1.74
SHROOM1Q2M3G4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
SHROOM1Q2M3G4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SHROOM1Q2M3G4 LINC02228-203ENST00000641970 1355 ntBASIC25.94■■□□□ 1.74
SHROOM1Q2M3G4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SHROOM1Q2M3G4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.93■■□□□ 1.74
SHROOM1Q2M3G4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SHROOM1Q2M3G4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SHROOM1Q2M3G4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
SHROOM1Q2M3G4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
SHROOM1Q2M3G4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.92■■□□□ 1.74
SHROOM1Q2M3G4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
SHROOM1Q2M3G4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
SHROOM1Q2M3G4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SHROOM1Q2M3G4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SHROOM1Q2M3G4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
SHROOM1Q2M3G4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
SHROOM1Q2M3G4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SHROOM1Q2M3G4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.91■■□□□ 1.74
SHROOM1Q2M3G4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
SHROOM1Q2M3G4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.91■■□□□ 1.74
SHROOM1Q2M3G4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SHROOM1Q2M3G4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SHROOM1Q2M3G4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.91■■□□□ 1.74
SHROOM1Q2M3G4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.91■■□□□ 1.74
SHROOM1Q2M3G4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
SHROOM1Q2M3G4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SHROOM1Q2M3G4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.91■■□□□ 1.74
SHROOM1Q2M3G4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SHROOM1Q2M3G4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.9■■□□□ 1.74
SHROOM1Q2M3G4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
SHROOM1Q2M3G4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
SHROOM1Q2M3G4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SHROOM1Q2M3G4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SHROOM1Q2M3G4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC25.9■■□□□ 1.74
SHROOM1Q2M3G4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms