Protein–RNA interactions for Protein: P97784

Cry1, Cryptochrome-1, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cry1P97784 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.79■□□□□ 0.76
Cry1P97784 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cry1P97784 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cry1P97784 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cry1P97784 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cry1P97784 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Cry1P97784 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry1P97784 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry1P97784 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry1P97784 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry1P97784 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.78■□□□□ 0.76
Cry1P97784 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cry1P97784 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry1P97784 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry1P97784 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry1P97784 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry1P97784 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Cry1P97784 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cry1P97784 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cry1P97784 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cry1P97784 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cry1P97784 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cry1P97784 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.77■□□□□ 0.76
Cry1P97784 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cry1P97784 Gm10602-201ENSMUST00000098239 609 ntBASIC19.77■□□□□ 0.76
Cry1P97784 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cry1P97784 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cry1P97784 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cry1P97784 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cry1P97784 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cry1P97784 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cry1P97784 Gm13234-201ENSMUST00000120010 747 ntBASIC19.75■□□□□ 0.75
Cry1P97784 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.75■□□□□ 0.75
Cry1P97784 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cry1P97784 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cry1P97784 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cry1P97784 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.74■□□□□ 0.75
Cry1P97784 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Cry1P97784 Gm27801-201ENSMUST00000184174 223 ntBASIC19.74■□□□□ 0.75
Cry1P97784 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.74■□□□□ 0.75
Cry1P97784 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Cry1P97784 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.74■□□□□ 0.75
Cry1P97784 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cry1P97784 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.74■□□□□ 0.75
Cry1P97784 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.74■□□□□ 0.75
Cry1P97784 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cry1P97784 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Cry1P97784 Gm12933-201ENSMUST00000120203 872 ntBASIC19.73■□□□□ 0.75
Cry1P97784 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cry1P97784 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.73■□□□□ 0.75
Cry1P97784 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cry1P97784 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.73■□□□□ 0.75
Cry1P97784 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.73■□□□□ 0.75
Cry1P97784 Reep4-203ENSMUST00000226563 1444 ntBASIC19.73■□□□□ 0.75
Cry1P97784 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cry1P97784 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cry1P97784 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cry1P97784 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cry1P97784 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cry1P97784 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cry1P97784 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cry1P97784 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cry1P97784 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cry1P97784 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cry1P97784 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cry1P97784 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cry1P97784 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cry1P97784 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Cry1P97784 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Cry1P97784 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cry1P97784 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cry1P97784 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cry1P97784 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.71■□□□□ 0.75
Cry1P97784 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cry1P97784 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cry1P97784 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cry1P97784 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cry1P97784 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cry1P97784 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cry1P97784 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.7■□□□□ 0.74
Cry1P97784 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cry1P97784 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cry1P97784 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cry1P97784 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cry1P97784 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cry1P97784 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cry1P97784 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cry1P97784 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.69■□□□□ 0.74
Cry1P97784 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Cry1P97784 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cry1P97784 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cry1P97784 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cry1P97784 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cry1P97784 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cry1P97784 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cry1P97784 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cry1P97784 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.69■□□□□ 0.74
Cry1P97784 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cry1P97784 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cry1P97784 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms