Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SgcaP82350 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.38■□□□□ 0.21
SgcaP82350 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SgcaP82350 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcaP82350 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcaP82350 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcaP82350 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcaP82350 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcaP82350 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.38■□□□□ 0.21
SgcaP82350 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcaP82350 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SgcaP82350 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcaP82350 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SgcaP82350 Gm14523-201ENSMUST00000117260 558 ntBASIC16.38■□□□□ 0.21
SgcaP82350 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcaP82350 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcaP82350 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcaP82350 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcaP82350 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcaP82350 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcaP82350 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SgcaP82350 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SgcaP82350 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SgcaP82350 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgcaP82350 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgcaP82350 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgcaP82350 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgcaP82350 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.36■□□□□ 0.21
SgcaP82350 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgcaP82350 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgcaP82350 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.36■□□□□ 0.21
SgcaP82350 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgcaP82350 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SgcaP82350 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SgcaP82350 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgcaP82350 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.36■□□□□ 0.21
SgcaP82350 Golph3-205ENSMUST00000228671 2842 ntBASIC16.36■□□□□ 0.21
SgcaP82350 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SgcaP82350 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SgcaP82350 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgcaP82350 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgcaP82350 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgcaP82350 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SgcaP82350 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgcaP82350 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgcaP82350 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgcaP82350 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgcaP82350 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgcaP82350 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgcaP82350 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
SgcaP82350 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgcaP82350 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgcaP82350 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.35■□□□□ 0.21
SgcaP82350 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgcaP82350 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgcaP82350 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SgcaP82350 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgcaP82350 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgcaP82350 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgcaP82350 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SgcaP82350 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.34■□□□□ 0.21
SgcaP82350 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgcaP82350 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgcaP82350 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgcaP82350 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SgcaP82350 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SgcaP82350 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgcaP82350 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SgcaP82350 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgcaP82350 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgcaP82350 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgcaP82350 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgcaP82350 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgcaP82350 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SgcaP82350 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SgcaP82350 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SgcaP82350 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SgcaP82350 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SgcaP82350 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SgcaP82350 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SgcaP82350 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgcaP82350 Gm7332-201ENSMUST00000118351 454 ntBASIC16.33■□□□□ 0.2
SgcaP82350 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.33■□□□□ 0.2
SgcaP82350 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgcaP82350 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgcaP82350 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SgcaP82350 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgcaP82350 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SgcaP82350 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.33■□□□□ 0.2
SgcaP82350 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.33■□□□□ 0.2
SgcaP82350 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgcaP82350 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgcaP82350 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgcaP82350 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgcaP82350 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SgcaP82350 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgcaP82350 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgcaP82350 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.32■□□□□ 0.2
SgcaP82350 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SgcaP82350 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms