Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rps28P62858 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rps28P62858 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rps28P62858 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rps28P62858 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rps28P62858 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rps28P62858 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC11.75□□□□□ -0.53
Rps28P62858 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rps28P62858 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rps28P62858 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.75□□□□□ -0.53
Rps28P62858 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rps28P62858 Gm43403-201ENSMUST00000198011 1786 ntBASIC11.75□□□□□ -0.53
Rps28P62858 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rps28P62858 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC11.75□□□□□ -0.53
Rps28P62858 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rps28P62858 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rps28P62858 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rps28P62858 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rps28P62858 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rps28P62858 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Rps28P62858 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rps28P62858 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rps28P62858 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rps28P62858 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rps28P62858 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rps28P62858 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rps28P62858 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rps28P62858 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rps28P62858 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rps28P62858 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rps28P62858 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rps28P62858 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rps28P62858 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rps28P62858 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rps28P62858 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rps28P62858 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rps28P62858 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rps28P62858 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC11.74□□□□□ -0.53
Rps28P62858 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rps28P62858 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rps28P62858 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rps28P62858 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rps28P62858 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rps28P62858 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rps28P62858 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rps28P62858 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rps28P62858 Dancr-204ENSMUST00000132389 2347 ntBASIC11.73□□□□□ -0.53
Rps28P62858 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rps28P62858 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rps28P62858 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rps28P62858 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rps28P62858 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rps28P62858 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rps28P62858 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rps28P62858 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rps28P62858 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Rps28P62858 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rps28P62858 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rps28P62858 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rps28P62858 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rps28P62858 AC126028.2-201ENSMUST00000228100 1833 ntBASIC11.72□□□□□ -0.53
Rps28P62858 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rps28P62858 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC11.72□□□□□ -0.53
Rps28P62858 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rps28P62858 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rps28P62858 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rps28P62858 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rps28P62858 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rps28P62858 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rps28P62858 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rps28P62858 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rps28P62858 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rps28P62858 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rps28P62858 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rps28P62858 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Rps28P62858 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rps28P62858 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rps28P62858 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rps28P62858 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rps28P62858 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rps28P62858 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rps28P62858 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rps28P62858 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Rps28P62858 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rps28P62858 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC11.71□□□□□ -0.54
Rps28P62858 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rps28P62858 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rps28P62858 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rps28P62858 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rps28P62858 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rps28P62858 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rps28P62858 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rps28P62858 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rps28P62858 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rps28P62858 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rps28P62858 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rps28P62858 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rps28P62858 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Rps28P62858 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Rps28P62858 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms