Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 HCM1YCR065W 1695 nt4.35□□□□□ -1.71
LSM5P40089 BOP2YLR267W 1713 nt4.35□□□□□ -1.71
LSM5P40089 CDC15YAR019C 2925 nt4.35□□□□□ -1.71
LSM5P40089 SKG3YLR187W 3081 nt4.35□□□□□ -1.71
LSM5P40089 MET12YPL023C 1974 nt4.34□□□□□ -1.71
LSM5P40089 NBP2YDR162C 711 nt4.34□□□□□ -1.71
LSM5P40089 HNT2YDR305C 654 nt4.34□□□□□ -1.71
LSM5P40089 YGL132WYGL132W 336 nt4.34□□□□□ -1.71
LSM5P40089 CLC1YGR167W 702 nt4.34□□□□□ -1.71
LSM5P40089 MNN11YJL183W 1269 nt4.34□□□□□ -1.71
LSM5P40089 YNK1YKL067W 462 nt4.34□□□□□ -1.71
LSM5P40089 YIM1YMR152W 1098 nt4.34□□□□□ -1.71
LSM5P40089 MVD1YNR043W 1191 nt4.34□□□□□ -1.71
LSM5P40089 IDI1YPL117C 867 nt4.34□□□□□ -1.71
LSM5P40089 YBR056W-AYBR056W-A 201 nt4.34□□□□□ -1.71
LSM5P40089 BMT2YBR141C 1014 nt4.34□□□□□ -1.71
LSM5P40089 LYP1YNL268W 1836 nt4.34□□□□□ -1.71
LSM5P40089 HMG1YML075C 3165 nt4.34□□□□□ -1.72
LSM5P40089 DPH6YLR143W 2058 nt4.33□□□□□ -1.72
LSM5P40089 EUG1YDR518W 1554 nt4.33□□□□□ -1.72
LSM5P40089 YDL241WYDL241W 372 nt4.33□□□□□ -1.72
LSM5P40089 SPO73YER046W 432 nt4.33□□□□□ -1.72
LSM5P40089 SPI1YER150W 447 nt4.33□□□□□ -1.72
LSM5P40089 MRPS35YGR165W 1038 nt4.33□□□□□ -1.72
LSM5P40089 TIF5YPR041W 1218 nt4.33□□□□□ -1.72
LSM5P40089 RNA14YMR061W 2034 nt4.33□□□□□ -1.72
LSM5P40089 RTC1YOL138C 4026 nt4.32□□□□□ -1.72
LSM5P40089 YDR161WYDR161W 1164 nt4.32□□□□□ -1.72
LSM5P40089 COS8YHL048W 1146 nt4.32□□□□□ -1.72
LSM5P40089 BET1YIL004C 429 nt4.32□□□□□ -1.72
LSM5P40089 NMD4YLR363C 657 nt4.32□□□□□ -1.72
LSM5P40089 YPL278CYPL278C 303 nt4.32□□□□□ -1.72
LSM5P40089 YSA1YBR111C 696 nt4.32□□□□□ -1.72
LSM5P40089 YCL022CYCL022C 516 nt4.32□□□□□ -1.72
LSM5P40089 ALO1YML086C 1581 nt4.31□□□□□ -1.72
LSM5P40089 BCK2YER167W 2556 nt4.31□□□□□ -1.72
LSM5P40089 RMD5YDR255C 1266 nt4.31□□□□□ -1.72
LSM5P40089 LYS5YGL154C 819 nt4.31□□□□□ -1.72
LSM5P40089 YGR149WYGR149W 1299 nt4.31□□□□□ -1.72
LSM5P40089 GPP1YIL053W 753 nt4.31□□□□□ -1.72
LSM5P40089 YAL047W-AYAL047W-A 330 nt4.31□□□□□ -1.72
LSM5P40089 YBL059WYBL059W 582 nt4.31□□□□□ -1.72
LSM5P40089 YNL144W-AYNL144W-A 84 nt4.31□□□□□ -1.72
LSM5P40089 YOR020W-AYOR020W-A 273 nt4.31□□□□□ -1.72
LSM5P40089 KAP114YGL241W 3015 nt4.31□□□□□ -1.72
LSM5P40089 SLM5YCR024C 1479 nt4.3□□□□□ -1.72
LSM5P40089 ZPR1YGR211W 1461 nt4.3□□□□□ -1.72
LSM5P40089 AZR1YGR224W 1842 nt4.3□□□□□ -1.72
LSM5P40089 SEG2YKL105C 3399 nt4.3□□□□□ -1.72
LSM5P40089 NOP6YDL213C 678 nt4.3□□□□□ -1.72
LSM5P40089 KRE28YDR532C 1158 nt4.3□□□□□ -1.72
LSM5P40089 YDR545C-AYDR545C-A 480 nt4.3□□□□□ -1.72
LSM5P40089 YEL077W-AYEL077W-A 483 nt4.3□□□□□ -1.72
LSM5P40089 YER190C-BYER190C-B 483 nt4.3□□□□□ -1.72
LSM5P40089 YFL068WYFL068W 483 nt4.3□□□□□ -1.72
LSM5P40089 YGR296C-BYGR296C-B 483 nt4.3□□□□□ -1.72
LSM5P40089 YHL050W-AYHL050W-A 483 nt4.3□□□□□ -1.72
LSM5P40089 YHR219C-AYHR219C-A 483 nt4.3□□□□□ -1.72
LSM5P40089 YIL177W-AYIL177W-A 483 nt4.3□□□□□ -1.72
LSM5P40089 YJL225W-AYJL225W-A 483 nt4.3□□□□□ -1.72
LSM5P40089 YLL066W-AYLL066W-A 483 nt4.3□□□□□ -1.72
LSM5P40089 YLL067W-AYLL067W-A 483 nt4.3□□□□□ -1.72
LSM5P40089 YLR363W-AYLR363W-A 258 nt4.3□□□□□ -1.72
LSM5P40089 YLR466C-AYLR466C-A 483 nt4.3□□□□□ -1.72
LSM5P40089 YLR467C-AYLR467C-A 483 nt4.3□□□□□ -1.72
LSM5P40089 YML133W-BYML133W-B 483 nt4.3□□□□□ -1.72
LSM5P40089 YNL339W-BYNL339W-B 483 nt4.3□□□□□ -1.72
LSM5P40089 YBL113W-AYBL113W-A 483 nt4.3□□□□□ -1.72
LSM5P40089 YOR396C-AYOR396C-A 483 nt4.3□□□□□ -1.72
LSM5P40089 POC4YPL144W 447 nt4.3□□□□□ -1.72
LSM5P40089 YPL283W-BYPL283W-B 483 nt4.3□□□□□ -1.72
LSM5P40089 YPR204C-AYPR204C-A 483 nt4.3□□□□□ -1.72
LSM5P40089 MSA1YOR066W 1890 nt4.3□□□□□ -1.72
LSM5P40089 CTK1YKL139W 1587 nt4.29□□□□□ -1.72
LSM5P40089 RXT3YDL076C 885 nt4.29□□□□□ -1.72
LSM5P40089 RIP1YEL024W 648 nt4.29□□□□□ -1.72
LSM5P40089 tK(CUU)CtK(CUU)C 73 nt4.29□□□□□ -1.72
LSM5P40089 tK(CUU)D1tK(CUU)D1 73 nt4.29□□□□□ -1.72
LSM5P40089 tK(CUU)D2tK(CUU)D2 73 nt4.29□□□□□ -1.72
LSM5P40089 tK(CUU)E1tK(CUU)E1 73 nt4.29□□□□□ -1.72
LSM5P40089 tK(CUU)E2tK(CUU)E2 73 nt4.29□□□□□ -1.72
LSM5P40089 tK(CUU)FtK(CUU)F 73 nt4.29□□□□□ -1.72
LSM5P40089 tK(CUU)G1tK(CUU)G1 73 nt4.29□□□□□ -1.72
LSM5P40089 tK(CUU)G2tK(CUU)G2 73 nt4.29□□□□□ -1.72
LSM5P40089 tK(CUU)G3tK(CUU)G3 73 nt4.29□□□□□ -1.72
LSM5P40089 tK(CUU)ItK(CUU)I 73 nt4.29□□□□□ -1.72
LSM5P40089 tK(CUU)JtK(CUU)J 73 nt4.29□□□□□ -1.72
LSM5P40089 tK(CUU)KtK(CUU)K 73 nt4.29□□□□□ -1.72
LSM5P40089 tK(CUU)MtK(CUU)M 73 nt4.29□□□□□ -1.72
LSM5P40089 tK(CUU)PtK(CUU)P 73 nt4.29□□□□□ -1.72
LSM5P40089 TOS8YGL096W 831 nt4.29□□□□□ -1.72
LSM5P40089 RAD54YGL163C 2697 nt4.29□□□□□ -1.72
LSM5P40089 YMR221CYMR221C 1515 nt4.29□□□□□ -1.72
LSM5P40089 ISW2YOR304W 3363 nt4.29□□□□□ -1.72
LSM5P40089 AKL1YBR059C 3327 nt4.29□□□□□ -1.72
LSM5P40089 VPS27YNR006W 1869 nt4.28□□□□□ -1.72
LSM5P40089 RPS11AYDR025W 471 nt4.28□□□□□ -1.72
LSM5P40089 RPL34AYER056C-A 366 nt4.28□□□□□ -1.72
LSM5P40089 GTF1YGR102C 552 nt4.28□□□□□ -1.72
LSM5P40089 YHL049CYHL049C 816 nt4.28□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 37.2 ms