Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nedd8P29595 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.17■□□□□ 0.5
Nedd8P29595 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Nedd8P29595 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nedd8P29595 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nedd8P29595 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nedd8P29595 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nedd8P29595 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nedd8P29595 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nedd8P29595 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nedd8P29595 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nedd8P29595 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nedd8P29595 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Nedd8P29595 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.17■□□□□ 0.5
Nedd8P29595 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nedd8P29595 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nedd8P29595 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Nedd8P29595 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nedd8P29595 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nedd8P29595 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nedd8P29595 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nedd8P29595 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nedd8P29595 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nedd8P29595 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Nedd8P29595 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nedd8P29595 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nedd8P29595 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nedd8P29595 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nedd8P29595 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nedd8P29595 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nedd8P29595 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nedd8P29595 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nedd8P29595 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nedd8P29595 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nedd8P29595 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.15■□□□□ 0.5
Nedd8P29595 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nedd8P29595 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nedd8P29595 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nedd8P29595 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nedd8P29595 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nedd8P29595 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Nedd8P29595 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nedd8P29595 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nedd8P29595 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nedd8P29595 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nedd8P29595 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.13■□□□□ 0.49
Nedd8P29595 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nedd8P29595 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nedd8P29595 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nedd8P29595 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nedd8P29595 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nedd8P29595 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nedd8P29595 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nedd8P29595 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.13■□□□□ 0.49
Nedd8P29595 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nedd8P29595 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.13■□□□□ 0.49
Nedd8P29595 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nedd8P29595 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nedd8P29595 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nedd8P29595 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
Nedd8P29595 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nedd8P29595 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nedd8P29595 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nedd8P29595 Gm8503-201ENSMUST00000118131 455 ntBASIC18.12■□□□□ 0.49
Nedd8P29595 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nedd8P29595 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nedd8P29595 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Nedd8P29595 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nedd8P29595 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nedd8P29595 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nedd8P29595 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Nedd8P29595 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nedd8P29595 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Nedd8P29595 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Nedd8P29595 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nedd8P29595 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.11■□□□□ 0.49
Nedd8P29595 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nedd8P29595 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nedd8P29595 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.11■□□□□ 0.49
Nedd8P29595 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.11■□□□□ 0.49
Nedd8P29595 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Nedd8P29595 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nedd8P29595 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nedd8P29595 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nedd8P29595 Grk6-206ENSMUST00000224995 2971 ntBASIC18.11■□□□□ 0.49
Nedd8P29595 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nedd8P29595 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Nedd8P29595 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nedd8P29595 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.1■□□□□ 0.49
Nedd8P29595 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.1■□□□□ 0.49
Nedd8P29595 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nedd8P29595 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nedd8P29595 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nedd8P29595 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nedd8P29595 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nedd8P29595 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nedd8P29595 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nedd8P29595 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nedd8P29595 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Nedd8P29595 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms