Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06320 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06320 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC12.42□□□□□ -0.42
P06320 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC12.42□□□□□ -0.42
P06320 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P06320 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06320 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06320 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06320 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06320 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06320 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
P06320 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC12.41□□□□□ -0.42
P06320 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06320 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC12.41□□□□□ -0.42
P06320 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
P06320 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC12.41□□□□□ -0.42
P06320 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
P06320 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
P06320 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06320 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06320 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
P06320 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P06320 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06320 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC12.41□□□□□ -0.42
P06320 Hsf1-204ENSMUST00000226872 2104 ntBASIC12.41□□□□□ -0.42
P06320 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
P06320 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06320 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06320 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06320 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06320 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
P06320 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06320 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06320 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06320 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
P06320 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
P06320 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06320 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06320 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
P06320 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06320 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06320 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06320 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P06320 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06320 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06320 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06320 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC12.4□□□□□ -0.42
P06320 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P06320 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
P06320 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
P06320 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06320 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
P06320 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06320 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06320 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
P06320 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06320 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06320 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06320 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
P06320 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
P06320 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC12.39□□□□□ -0.43
P06320 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC12.39□□□□□ -0.43
P06320 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
P06320 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06320 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06320 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06320 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06320 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06320 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
P06320 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06320 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06320 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P06320 AC151971.4-201ENSMUST00000214717 704 ntBASIC12.38□□□□□ -0.43
P06320 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC12.38□□□□□ -0.43
P06320 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06320 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC12.38□□□□□ -0.43
P06320 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06320 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06320 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06320 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06320 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06320 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06320 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06320 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC12.37□□□□□ -0.43
P06320 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06320 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06320 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P06320 Gm11687-201ENSMUST00000118911 886 ntBASIC12.37□□□□□ -0.43
P06320 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC12.37□□□□□ -0.43
P06320 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC12.37□□□□□ -0.43
P06320 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06320 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P06320 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06320 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
P06320 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06320 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06320 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06320 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P06320 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
P06320 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms