Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04214 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04214 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04214 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.82■□□□□ 0.92
P04214 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04214 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04214 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04214 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04214 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.82■□□□□ 0.92
P04214 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
P04214 Gm37856-201ENSMUST00000191634 999 ntBASIC20.82■□□□□ 0.92
P04214 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
P04214 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04214 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
P04214 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04214 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04214 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
P04214 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
P04214 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04214 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04214 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04214 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04214 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
P04214 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P04214 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
P04214 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P04214 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
P04214 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
P04214 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P04214 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
P04214 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
P04214 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
P04214 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
P04214 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.79■□□□□ 0.92
P04214 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.79■□□□□ 0.92
P04214 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
P04214 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
P04214 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04214 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04214 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04214 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.78■□□□□ 0.92
P04214 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.78■□□□□ 0.92
P04214 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.78■□□□□ 0.92
P04214 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.78■□□□□ 0.92
P04214 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.78■□□□□ 0.92
P04214 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04214 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04214 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
P04214 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
P04214 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04214 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04214 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04214 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04214 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
P04214 Mir7071-201ENSMUST00000184847 69 ntBASIC20.77■□□□□ 0.92
P04214 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04214 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04214 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04214 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04214 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
P04214 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04214 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
P04214 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
P04214 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.76■□□□□ 0.91
P04214 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.76■□□□□ 0.91
P04214 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
P04214 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04214 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04214 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04214 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04214 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
P04214 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
P04214 Gm10812-201ENSMUST00000099864 546 ntBASIC20.76■□□□□ 0.91
P04214 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04214 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
P04214 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04214 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04214 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
P04214 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
P04214 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.75■□□□□ 0.91
P04214 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.75■□□□□ 0.91
P04214 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
P04214 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
P04214 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
P04214 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
P04214 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.74■□□□□ 0.91
P04214 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
P04214 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
P04214 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
P04214 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.74■□□□□ 0.91
P04214 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.74■□□□□ 0.91
P04214 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
P04214 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
P04214 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
P04214 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
P04214 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
P04214 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
P04214 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
P04214 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
P04214 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms